Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
CLIP1P30622 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.74□□□□□ -1.81
CLIP1P30622 SNORA25.6-201ENST00000364121 118 ntBASIC3.73□□□□□ -1.81
CLIP1P30622 DYNLT3P1-201ENST00000378574 347 ntBASIC3.73□□□□□ -1.81
CLIP1P30622 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLIP1P30622 DPH3P2-201ENST00000422618 250 ntBASIC3.73□□□□□ -1.81
CLIP1P30622 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
CLIP1P30622 AC096638.1-201ENST00000444678 216 ntBASIC3.73□□□□□ -1.81
CLIP1P30622 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.73□□□□□ -1.81
CLIP1P30622 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.73□□□□□ -1.81
CLIP1P30622 AC092436.1-201ENST00000506450 503 ntBASIC3.73□□□□□ -1.81
CLIP1P30622 NDUFB4P9-201ENST00000511646 388 ntBASIC3.73□□□□□ -1.81
CLIP1P30622 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.73□□□□□ -1.81
CLIP1P30622 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.73□□□□□ -1.81
CLIP1P30622 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.73□□□□□ -1.81
CLIP1P30622 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.73□□□□□ -1.81
CLIP1P30622 AC025281.1-201ENST00000567026 265 ntBASIC3.73□□□□□ -1.81
CLIP1P30622 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.73□□□□□ -1.81
CLIP1P30622 AC006254.3-201ENST00000603353 884 ntBASIC3.73□□□□□ -1.81
CLIP1P30622 AC103710.3-201ENST00000608157 948 ntBASIC3.73□□□□□ -1.81
CLIP1P30622 AL136964.1-201ENST00000622038 2990 ntBASIC3.73□□□□□ -1.81
CLIP1P30622 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.73□□□□□ -1.81
CLIP1P30622 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
CLIP1P30622 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.72□□□□□ -1.81
CLIP1P30622 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.72□□□□□ -1.81
CLIP1P30622 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLIP1P30622 FRG1BP-201ENST00000278882 761 ntBASIC3.72□□□□□ -1.81
CLIP1P30622 RNU6-178P-201ENST00000384631 104 ntBASIC3.72□□□□□ -1.81
CLIP1P30622 AL591416.1-201ENST00000404015 867 ntBASIC3.72□□□□□ -1.81
CLIP1P30622 RNU4-26P-201ENST00000410270 107 ntBASIC3.72□□□□□ -1.81
CLIP1P30622 AC007064.1-201ENST00000412238 351 ntBASIC3.72□□□□□ -1.81
CLIP1P30622 AL137014.1-201ENST00000420490 1226 ntBASIC3.72□□□□□ -1.81
CLIP1P30622 AC098826.1-201ENST00000433943 471 ntBASIC3.72□□□□□ -1.81
CLIP1P30622 AC008837.1-201ENST00000511513 412 ntBASIC3.72□□□□□ -1.81
CLIP1P30622 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.72□□□□□ -1.81
CLIP1P30622 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.72□□□□□ -1.81
CLIP1P30622 AC017076.1-201ENST00000607613 578 ntBASIC3.72□□□□□ -1.81
CLIP1P30622 AC099778.2-201ENST00000610904 211 ntBASIC3.72□□□□□ -1.81
CLIP1P30622 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.72□□□□□ -1.81
CLIP1P30622 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
CLIP1P30622 MIR21-201ENST00000362134 72 ntBASIC3.71□□□□□ -1.82
CLIP1P30622 SNORD6-201ENST00000365444 73 ntBASIC3.71□□□□□ -1.82
CLIP1P30622 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.71□□□□□ -1.82
CLIP1P30622 AL024509.2-201ENST00000493462 493 ntBASIC3.71□□□□□ -1.82
CLIP1P30622 AP001086.1-201ENST00000494882 321 ntBASIC3.71□□□□□ -1.82
CLIP1P30622 AP003467.2-201ENST00000520175 319 ntBASIC3.71□□□□□ -1.82
CLIP1P30622 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLIP1P30622 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.71□□□□□ -1.82
CLIP1P30622 AC073348.1-201ENST00000623002 331 ntBASIC3.71□□□□□ -1.82
CLIP1P30622 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLIP1P30622 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.71□□□□□ -1.82
CLIP1P30622 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLIP1P30622 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.71□□□□□ -1.82
CLIP1P30622 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLIP1P30622 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLIP1P30622 AC004925.1-201ENST00000624256 2706 ntBASIC3.7□□□□□ -1.82
CLIP1P30622 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLIP1P30622 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.7□□□□□ -1.82
CLIP1P30622 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
CLIP1P30622 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.7□□□□□ -1.82
CLIP1P30622 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.7□□□□□ -1.82
CLIP1P30622 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.7□□□□□ -1.82
CLIP1P30622 AC241585.2-209ENST00000638217 143 ntBASIC3.7□□□□□ -1.82
CLIP1P30622 PHKBP1-201ENST00000450951 1951 ntBASIC3.7□□□□□ -1.82
CLIP1P30622 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.7□□□□□ -1.82
CLIP1P30622 AC092326.2-201ENST00000624772 1561 ntBASIC3.7□□□□□ -1.82
CLIP1P30622 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLIP1P30622 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.7□□□□□ -1.82
CLIP1P30622 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CLIP1P30622 RPL21P132-201ENST00000331267 462 ntBASIC3.7□□□□□ -1.82
CLIP1P30622 MIR764-201ENST00000390811 85 ntBASIC3.7□□□□□ -1.82
CLIP1P30622 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.7□□□□□ -1.82
CLIP1P30622 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.7□□□□□ -1.82
CLIP1P30622 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC3.7□□□□□ -1.82
CLIP1P30622 AC078899.3-201ENST00000599065 212 ntBASIC3.7□□□□□ -1.82
CLIP1P30622 AL392112.1-201ENST00000605115 829 ntBASIC3.7□□□□□ -1.82
CLIP1P30622 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLIP1P30622 AP001486.2-201ENST00000561652 5113 ntBASIC3.69□□□□□ -1.82
CLIP1P30622 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.69□□□□□ -1.82
CLIP1P30622 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.69□□□□□ -1.82
CLIP1P30622 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CLIP1P30622 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CLIP1P30622 AL024474.1-201ENST00000404655 591 ntBASIC3.69□□□□□ -1.82
CLIP1P30622 AL513477.1-202ENST00000417061 214 ntBASIC3.69□□□□□ -1.82
CLIP1P30622 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.69□□□□□ -1.82
CLIP1P30622 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.69□□□□□ -1.82
CLIP1P30622 RPL30P9-201ENST00000465586 330 ntBASIC3.69□□□□□ -1.82
CLIP1P30622 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.69□□□□□ -1.82
CLIP1P30622 OR4H12P-201ENST00000556269 907 ntBASIC3.69□□□□□ -1.82
CLIP1P30622 YWHAZP1-201ENST00000556286 722 ntBASIC3.69□□□□□ -1.82
CLIP1P30622 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.69□□□□□ -1.82
CLIP1P30622 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.69□□□□□ -1.82
CLIP1P30622 AL645944.1-201ENST00000603857 493 ntBASIC3.69□□□□□ -1.82
CLIP1P30622 AC068313.1-201ENST00000604028 1008 ntBASIC3.69□□□□□ -1.82
CLIP1P30622 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.68□□□□□ -1.82
CLIP1P30622 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.68□□□□□ -1.82
CLIP1P30622 XIAPP3-201ENST00000312918 795 ntBASIC3.68□□□□□ -1.82
CLIP1P30622 AL079342.1-201ENST00000401460 267 ntBASIC3.68□□□□□ -1.82
CLIP1P30622 HMGN2P3-201ENST00000433603 273 ntBASIC3.68□□□□□ -1.82
CLIP1P30622 RPS15AP28-201ENST00000435088 386 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms