Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.4□□□□□ -1.87
SHC1P29353 AC007115.1-201ENST00000546853 234 ntBASIC3.4□□□□□ -1.87
SHC1P29353 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
SHC1P29353 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.4□□□□□ -1.87
SHC1P29353 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.4□□□□□ -1.87
SHC1P29353 AP001180.3-201ENST00000582221 145 ntBASIC3.4□□□□□ -1.87
SHC1P29353 AC006130.2-201ENST00000586202 326 ntBASIC3.4□□□□□ -1.87
SHC1P29353 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.4□□□□□ -1.87
SHC1P29353 AC244505.7-201ENST00000599675 272 ntBASIC3.4□□□□□ -1.87
SHC1P29353 AC006539.2-201ENST00000601729 572 ntBASIC3.4□□□□□ -1.87
SHC1P29353 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.4□□□□□ -1.87
SHC1P29353 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
SHC1P29353 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.4□□□□□ -1.87
SHC1P29353 AL137849.1-201ENST00000604767 169 ntBASIC3.4□□□□□ -1.87
SHC1P29353 AC131235.4-201ENST00000609288 620 ntBASIC3.4□□□□□ -1.87
SHC1P29353 AC013562.2-201ENST00000611632 603 ntBASIC3.4□□□□□ -1.87
SHC1P29353 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.4□□□□□ -1.87
SHC1P29353 AC116618.1-201ENST00000634617 774 ntBASIC3.4□□□□□ -1.87
SHC1P29353 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.4□□□□□ -1.87
SHC1P29353 AC024560.2-201ENST00000507981 1497 ntBASIC3.4□□□□□ -1.87
SHC1P29353 AC109315.1-201ENST00000584143 1347 ntBASIC3.4□□□□□ -1.87
SHC1P29353 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SHC1P29353 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SHC1P29353 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.4□□□□□ -1.87
SHC1P29353 MTND4P5-201ENST00000435821 1374 ntBASIC3.39□□□□□ -1.87
SHC1P29353 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHC1P29353 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SHC1P29353 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.39□□□□□ -1.87
SHC1P29353 MFSD8-236ENST00000641509 4050 ntBASIC3.39□□□□□ -1.87
SHC1P29353 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SHC1P29353 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHC1P29353 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHC1P29353 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.39□□□□□ -1.87
SHC1P29353 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHC1P29353 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHC1P29353 Y_RNA.560-201ENST00000384689 102 ntBASIC3.39□□□□□ -1.87
SHC1P29353 AL138880.1-201ENST00000405824 642 ntBASIC3.39□□□□□ -1.87
SHC1P29353 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.39□□□□□ -1.87
SHC1P29353 OR51A3P-201ENST00000413596 924 ntBASIC3.39□□□□□ -1.87
SHC1P29353 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.39□□□□□ -1.87
SHC1P29353 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.39□□□□□ -1.87
SHC1P29353 RPS12P23-201ENST00000419579 400 ntBASIC3.39□□□□□ -1.87
SHC1P29353 MRPS36P1-201ENST00000421291 307 ntBASIC3.39□□□□□ -1.87
SHC1P29353 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.39□□□□□ -1.87
SHC1P29353 Z93242.1-201ENST00000427102 353 ntBASIC3.39□□□□□ -1.87
SHC1P29353 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.39□□□□□ -1.87
SHC1P29353 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.39□□□□□ -1.87
SHC1P29353 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.39□□□□□ -1.87
SHC1P29353 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.39□□□□□ -1.87
SHC1P29353 AL591503.2-201ENST00000442314 1005 ntBASIC3.39□□□□□ -1.87
SHC1P29353 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.39□□□□□ -1.87
SHC1P29353 RNU7-170P-201ENST00000459303 61 ntBASIC3.39□□□□□ -1.87
SHC1P29353 RPL5P24-201ENST00000463742 885 ntBASIC3.39□□□□□ -1.87
SHC1P29353 RPS20P21-201ENST00000466859 343 ntBASIC3.39□□□□□ -1.87
SHC1P29353 RN7SL542P-201ENST00000467147 294 ntBASIC3.39□□□□□ -1.87
SHC1P29353 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.39□□□□□ -1.87
SHC1P29353 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.39□□□□□ -1.87
SHC1P29353 NIPA2P2-201ENST00000496376 1083 ntBASIC3.39□□□□□ -1.87
SHC1P29353 AC108941.1-201ENST00000502853 530 ntBASIC3.39□□□□□ -1.87
SHC1P29353 AC147055.4-201ENST00000504399 745 ntBASIC3.39□□□□□ -1.87
SHC1P29353 AC112198.1-201ENST00000505369 1220 ntBASIC3.39□□□□□ -1.87
SHC1P29353 AC010587.2-201ENST00000511727 448 ntBASIC3.39□□□□□ -1.87
SHC1P29353 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.39□□□□□ -1.87
SHC1P29353 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.39□□□□□ -1.87
SHC1P29353 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.39□□□□□ -1.87
SHC1P29353 RN7SKP31-201ENST00000516354 278 ntBASIC3.39□□□□□ -1.87
SHC1P29353 RNU1-45P-201ENST00000517191 141 ntBASIC3.39□□□□□ -1.87
SHC1P29353 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.39□□□□□ -1.87
SHC1P29353 AC105185.1-201ENST00000518705 535 ntBASIC3.39□□□□□ -1.87
SHC1P29353 RPL12P22-201ENST00000519073 490 ntBASIC3.39□□□□□ -1.87
SHC1P29353 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.39□□□□□ -1.87
SHC1P29353 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.39□□□□□ -1.87
SHC1P29353 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.39□□□□□ -1.87
SHC1P29353 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC3.39□□□□□ -1.87
SHC1P29353 UBE2NP1-201ENST00000545592 458 ntBASIC3.39□□□□□ -1.87
SHC1P29353 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SHC1P29353 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.39□□□□□ -1.87
SHC1P29353 CBX3P5-201ENST00000552017 521 ntBASIC3.39□□□□□ -1.87
SHC1P29353 AC011260.1-201ENST00000578420 472 ntBASIC3.39□□□□□ -1.87
SHC1P29353 BPTFP1-201ENST00000579209 492 ntBASIC3.39□□□□□ -1.87
SHC1P29353 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC3.39□□□□□ -1.87
SHC1P29353 AC093227.2-201ENST00000589357 285 ntBASIC3.39□□□□□ -1.87
SHC1P29353 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.39□□□□□ -1.87
SHC1P29353 AC103881.1-201ENST00000603476 538 ntBASIC3.39□□□□□ -1.87
SHC1P29353 AL354760.1-201ENST00000608357 643 ntBASIC3.39□□□□□ -1.87
SHC1P29353 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SHC1P29353 AL607023.1-201ENST00000620045 248 ntBASIC3.39□□□□□ -1.87
SHC1P29353 AP004289.2-201ENST00000444413 1457 ntBASIC3.39□□□□□ -1.87
SHC1P29353 ANKRD20A17P-201ENST00000511745 1330 ntBASIC3.39□□□□□ -1.87
SHC1P29353 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SHC1P29353 MAPK10-372ENST00000641954 3413 ntBASIC3.38□□□□□ -1.87
SHC1P29353 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHC1P29353 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
SHC1P29353 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
SHC1P29353 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
SHC1P29353 U3.15-201ENST00000365398 212 ntBASIC3.38□□□□□ -1.87
SHC1P29353 SNORD3H-201ENST00000384486 214 ntBASIC3.38□□□□□ -1.87
SHC1P29353 RPS3AP26-201ENST00000398259 784 ntBASIC3.38□□□□□ -1.87
SHC1P29353 RNA5SP239-201ENST00000410218 129 ntBASIC3.38□□□□□ -1.87
SHC1P29353 RN7SKP159-201ENST00000410657 292 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms