Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN4P29074 MTND4P34-201ENST00000572715 1371 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 AL645568.2-201ENST00000432815 1337 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN4P29074 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN4P29074 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
PTPN4P29074 MIR34B-201ENST00000385076 84 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 EI24P2-201ENST00000397776 1076 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 AL603865.2-201ENST00000401679 213 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 RNA5SP129-201ENST00000410276 118 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 RNA5SP56-201ENST00000410277 118 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 RNA5SP107-201ENST00000411358 122 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 RPS7P9-201ENST00000414704 586 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 USP9YP21-201ENST00000420603 432 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 AC009237.2-201ENST00000421358 284 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN4P29074 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 MRPS18BP2-201ENST00000434310 759 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 RPL23AP83-201ENST00000434984 473 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 AC092393.1-201ENST00000439625 742 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 RPL23AP16-201ENST00000441715 421 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 RPL7P52-201ENST00000449200 742 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 NPM1P13-201ENST00000452663 865 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN4P29074 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.55□□□□□ -1.84
PTPN4P29074 MTCO3P2-201ENST00000457365 171 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 AC084357.1-201ENST00000473404 255 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 AC010301.1-201ENST00000473936 355 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 AC021205.2-201ENST00000480069 347 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 AL049830.2-201ENST00000480072 201 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 VPS26AP1-201ENST00000483197 979 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 AL024509.2-201ENST00000493462 493 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.55□□□□□ -1.84
PTPN4P29074 SUMO2P5-201ENST00000506790 245 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN4P29074 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN4P29074 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN4P29074 NDUFS5P6-201ENST00000529136 295 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 AP001317.1-201ENST00000531194 960 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 AC087897.1-201ENST00000550134 156 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 SYF2P1-201ENST00000550658 413 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN4P29074 TRAV15-201ENST00000556680 249 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 AC037471.2-201ENST00000564941 598 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
PTPN4P29074 AL158050.2-201ENST00000605336 568 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 MIR8058-201ENST00000615737 89 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 AL357559.1-201ENST00000622228 274 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 AC026634.1-201ENST00000634369 198 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 AC099654.8-201ENST00000637757 681 ntBASIC3.55□□□□□ -1.84
PTPN4P29074 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.55□□□□□ -1.84
PTPN4P29074 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.55□□□□□ -1.84
PTPN4P29074 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
PTPN4P29074 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.55□□□□□ -1.84
PTPN4P29074 AF117829.1-206ENST00000621883 3802 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN4P29074 ZNF542P-204ENST00000482727 1305 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN4P29074 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
PTPN4P29074 RNU6-1066P-201ENST00000363573 105 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 RNA5SP51-201ENST00000364750 119 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
PTPN4P29074 RSL24D1P1-201ENST00000404972 493 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 AC068533.1-201ENST00000418542 415 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 AC027644.1-201ENST00000419595 298 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 DPRXP1-201ENST00000426312 460 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 MTCYBP32-201ENST00000427945 1084 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 RPL23AP22-201ENST00000437556 453 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN4P29074 RPS24P6-201ENST00000452670 400 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.54□□□□□ -1.84
PTPN4P29074 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.54□□□□□ -1.84
PTPN4P29074 UBDP1-202ENST00000457888 382 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 snoU13.24-201ENST00000458998 104 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 AC104982.1-201ENST00000478775 574 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.54□□□□□ -1.84
PTPN4P29074 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.54□□□□□ -1.84
PTPN4P29074 FABP5P12-201ENST00000515543 389 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPN4P29074 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPN4P29074 AC093331.1-201ENST00000521474 169 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 AP000926.4-201ENST00000527351 454 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 DEFB130C-202ENST00000530001 230 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.54□□□□□ -1.84
PTPN4P29074 AC044913.1-201ENST00000557200 430 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.54□□□□□ -1.84
PTPN4P29074 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.54□□□□□ -1.84
PTPN4P29074 AC007179.3-201ENST00000604976 235 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 RNU1-30P-201ENST00000606575 163 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.54□□□□□ -1.84
PTPN4P29074 AL592148.2-201ENST00000612210 372 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 AC110801.1-201ENST00000623590 212 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 AC098679.5-201ENST00000624394 571 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 AC013437.2-201ENST00000639587 677 ntBASIC3.54□□□□□ -1.84
PTPN4P29074 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN4P29074 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTPN4P29074 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
PTPN4P29074 ZNF826P-207ENST00000622273 1910 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms