Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 UBE2Q2P12-201ENST00000414573 204 ntBASIC6.09□□□□□ -1.43
RXRBP28702 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC6.09□□□□□ -1.43
RXRBP28702 EIF1P3-201ENST00000423841 334 ntBASIC6.09□□□□□ -1.43
RXRBP28702 DPY19L1P2-201ENST00000426647 915 ntBASIC6.09□□□□□ -1.43
RXRBP28702 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.09□□□□□ -1.43
RXRBP28702 RPL23AP4-201ENST00000427757 463 ntBASIC6.09□□□□□ -1.43
RXRBP28702 AC108059.2-201ENST00000434626 151 ntBASIC6.09□□□□□ -1.43
RXRBP28702 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC6.09□□□□□ -1.43
RXRBP28702 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC6.09□□□□□ -1.43
RXRBP28702 RPL26P28-201ENST00000451325 435 ntBASIC6.09□□□□□ -1.43
RXRBP28702 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC6.09□□□□□ -1.43
RXRBP28702 RPL36AP51-201ENST00000487216 318 ntBASIC6.09□□□□□ -1.43
RXRBP28702 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RXRBP28702 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.09□□□□□ -1.43
RXRBP28702 AC013828.2-201ENST00000532487 235 ntBASIC6.09□□□□□ -1.43
RXRBP28702 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.09□□□□□ -1.43
RXRBP28702 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC6.09□□□□□ -1.43
RXRBP28702 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.09□□□□□ -1.43
RXRBP28702 HMGN1P30-201ENST00000589286 268 ntBASIC6.09□□□□□ -1.43
RXRBP28702 AC105429.2-201ENST00000610567 517 ntBASIC6.09□□□□□ -1.43
RXRBP28702 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC6.09□□□□□ -1.43
RXRBP28702 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC6.09□□□□□ -1.43
RXRBP28702 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC6.09□□□□□ -1.43
RXRBP28702 AC119674.1-212ENST00000641155 993 ntBASIC6.09□□□□□ -1.43
RXRBP28702 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RXRBP28702 AC010266.2-201ENST00000564741 3255 ntBASIC6.09□□□□□ -1.43
RXRBP28702 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RXRBP28702 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RXRBP28702 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.44
RXRBP28702 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RXRBP28702 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
RXRBP28702 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
RXRBP28702 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.08□□□□□ -1.44
RXRBP28702 AC006378.2-201ENST00000623178 2476 ntBASIC6.08□□□□□ -1.44
RXRBP28702 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
RXRBP28702 AC133552.1-201ENST00000569988 4007 ntBASIC6.08□□□□□ -1.44
RXRBP28702 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RXRBP28702 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
RXRBP28702 ARHGAP42P1-201ENST00000507474 1976 ntBASIC6.08□□□□□ -1.44
RXRBP28702 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.08□□□□□ -1.44
RXRBP28702 RNU1-130P-201ENST00000363930 160 ntBASIC6.08□□□□□ -1.44
RXRBP28702 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RXRBP28702 RNU6-1122P-201ENST00000384449 107 ntBASIC6.08□□□□□ -1.44
RXRBP28702 RPS7P15-201ENST00000415804 584 ntBASIC6.08□□□□□ -1.44
RXRBP28702 MTCO2P5-201ENST00000422621 426 ntBASIC6.08□□□□□ -1.44
RXRBP28702 AL353678.1-201ENST00000422735 741 ntBASIC6.08□□□□□ -1.44
RXRBP28702 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC6.08□□□□□ -1.44
RXRBP28702 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC6.08□□□□□ -1.44
RXRBP28702 NPM1P34-201ENST00000428821 893 ntBASIC6.08□□□□□ -1.44
RXRBP28702 TRAPPC2P8-201ENST00000440676 396 ntBASIC6.08□□□□□ -1.44
RXRBP28702 SLC31A1P1-201ENST00000451221 567 ntBASIC6.08□□□□□ -1.44
RXRBP28702 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.08□□□□□ -1.44
RXRBP28702 SNORA19.2-201ENST00000516013 114 ntBASIC6.08□□□□□ -1.44
RXRBP28702 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC6.08□□□□□ -1.44
RXRBP28702 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC6.08□□□□□ -1.44
RXRBP28702 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC6.08□□□□□ -1.44
RXRBP28702 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC6.08□□□□□ -1.44
RXRBP28702 HSPE1P5-201ENST00000561489 272 ntBASIC6.08□□□□□ -1.44
RXRBP28702 AL845331.3-202ENST00000562856 261 ntBASIC6.08□□□□□ -1.44
RXRBP28702 AC093249.4-201ENST00000564755 259 ntBASIC6.08□□□□□ -1.44
RXRBP28702 MIR3171-201ENST00000584270 74 ntBASIC6.08□□□□□ -1.44
RXRBP28702 AC234782.5-201ENST00000617723 324 ntBASIC6.08□□□□□ -1.44
RXRBP28702 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.08□□□□□ -1.44
RXRBP28702 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RXRBP28702 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RXRBP28702 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC6.08□□□□□ -1.44
RXRBP28702 AL442128.2-201ENST00000620246 1824 ntBASIC6.08□□□□□ -1.44
RXRBP28702 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RXRBP28702 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RXRBP28702 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RXRBP28702 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
RXRBP28702 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RXRBP28702 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RXRBP28702 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RXRBP28702 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RXRBP28702 MFSD8-242ENST00000641690 4199 ntBASIC6.07□□□□□ -1.44
RXRBP28702 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
RXRBP28702 MTND5P1-201ENST00000445440 1375 ntBASIC6.07□□□□□ -1.44
RXRBP28702 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RXRBP28702 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
RXRBP28702 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC6.07□□□□□ -1.44
RXRBP28702 MTCO1P14-201ENST00000441695 1559 ntBASIC6.07□□□□□ -1.44
RXRBP28702 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RXRBP28702 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
RXRBP28702 RNU6-282P-201ENST00000365357 103 ntBASIC6.07□□□□□ -1.44
RXRBP28702 Y_RNA.481-201ENST00000384373 102 ntBASIC6.07□□□□□ -1.44
RXRBP28702 VN1R8P-201ENST00000407739 893 ntBASIC6.07□□□□□ -1.44
RXRBP28702 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC6.07□□□□□ -1.44
RXRBP28702 AL450992.3-201ENST00000413192 568 ntBASIC6.07□□□□□ -1.44
RXRBP28702 AC083875.1-201ENST00000419509 405 ntBASIC6.07□□□□□ -1.44
RXRBP28702 E2F6P2-201ENST00000420708 748 ntBASIC6.07□□□□□ -1.44
RXRBP28702 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.07□□□□□ -1.44
RXRBP28702 RPL21P110-201ENST00000433345 446 ntBASIC6.07□□□□□ -1.44
RXRBP28702 NPM1P18-201ENST00000434232 732 ntBASIC6.07□□□□□ -1.44
RXRBP28702 RPL7P54-201ENST00000438336 674 ntBASIC6.07□□□□□ -1.44
RXRBP28702 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC6.07□□□□□ -1.44
RXRBP28702 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC6.07□□□□□ -1.44
RXRBP28702 AL121877.1-201ENST00000453704 622 ntBASIC6.07□□□□□ -1.44
RXRBP28702 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC6.07□□□□□ -1.44
RXRBP28702 MTND1P3-201ENST00000484956 952 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms