Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.97□□□□□ -1.77
ABCD3P28288 RNU6-759P-201ENST00000516740 103 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.97□□□□□ -1.77
ABCD3P28288 AC100770.1-201ENST00000532310 322 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.97□□□□□ -1.77
ABCD3P28288 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.97□□□□□ -1.77
ABCD3P28288 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.97□□□□□ -1.77
ABCD3P28288 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.97□□□□□ -1.77
ABCD3P28288 AC023161.2-201ENST00000551218 780 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.97□□□□□ -1.77
ABCD3P28288 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.97□□□□□ -1.77
ABCD3P28288 AC012435.1-202ENST00000568772 240 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.97□□□□□ -1.77
ABCD3P28288 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC3.97□□□□□ -1.77
ABCD3P28288 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.97□□□□□ -1.77
ABCD3P28288 AC068790.5-201ENST00000602741 355 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 AL109653.1-201ENST00000603091 248 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 AL049634.3-201ENST00000604968 457 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 AC092354.2-201ENST00000607786 514 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 AC114781.5-201ENST00000615297 108 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.97□□□□□ -1.77
ABCD3P28288 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.97□□□□□ -1.77
ABCD3P28288 AC068057.2-201ENST00000624047 895 ntBASIC3.97□□□□□ -1.77
ABCD3P28288 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.97□□□□□ -1.77
ABCD3P28288 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ABCD3P28288 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ABCD3P28288 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
ABCD3P28288 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
ABCD3P28288 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.97□□□□□ -1.77
ABCD3P28288 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
ABCD3P28288 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
ABCD3P28288 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.96□□□□□ -1.77
ABCD3P28288 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
ABCD3P28288 CR383658.2-201ENST00000547576 1525 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
ABCD3P28288 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ABCD3P28288 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.96□□□□□ -1.78
ABCD3P28288 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ABCD3P28288 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.96□□□□□ -1.78
ABCD3P28288 RNA5SP502-201ENST00000362694 119 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 RNY4P24-201ENST00000362735 96 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 RNU1-132P-201ENST00000364300 164 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 RNA5SP366-201ENST00000365454 123 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 RHOT1P2-201ENST00000366423 333 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.96□□□□□ -1.78
ABCD3P28288 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.96□□□□□ -1.78
ABCD3P28288 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC3.96□□□□□ -1.78
ABCD3P28288 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.96□□□□□ -1.78
ABCD3P28288 DUTP6-201ENST00000425573 462 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.96□□□□□ -1.78
ABCD3P28288 VDAC1P3-201ENST00000434069 851 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.96□□□□□ -1.78
ABCD3P28288 ABCF2P2-201ENST00000450549 296 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.96□□□□□ -1.78
ABCD3P28288 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.96□□□□□ -1.78
ABCD3P28288 RPL23AP81-201ENST00000455252 467 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.96□□□□□ -1.78
ABCD3P28288 OR6K1P-201ENST00000456766 971 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
ABCD3P28288 snoU13.4-201ENST00000458916 104 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 AC109327.1-201ENST00000471666 403 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 AL024509.2-201ENST00000493462 493 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 RN7SL691P-201ENST00000494487 301 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
ABCD3P28288 AL592156.1-201ENST00000508758 304 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 AC004062.1-201ENST00000509926 645 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.96□□□□□ -1.78
ABCD3P28288 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.96□□□□□ -1.78
ABCD3P28288 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.96□□□□□ -1.78
ABCD3P28288 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.96□□□□□ -1.78
ABCD3P28288 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.96□□□□□ -1.78
ABCD3P28288 AC013828.2-201ENST00000532487 235 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
ABCD3P28288 AKIRIN1P1-201ENST00000547384 544 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 SETP2-201ENST00000553886 926 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 AL109766.1-201ENST00000555080 552 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.96□□□□□ -1.78
ABCD3P28288 MIR544B-201ENST00000582372 78 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC3.96□□□□□ -1.78
ABCD3P28288 AL139286.1-201ENST00000604465 483 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 AC107214.2-201ENST00000608204 634 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 AL392048.1-201ENST00000613946 534 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 MIR6758-201ENST00000620653 63 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
ABCD3P28288 AL353748.2-201ENST00000622148 471 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 AC008443.7-201ENST00000622195 246 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 AL445363.3-201ENST00000623080 671 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 AC019278.1-201ENST00000623516 479 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ABCD3P28288 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.96□□□□□ -1.78
ABCD3P28288 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.96□□□□□ -1.78
ABCD3P28288 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.96□□□□□ -1.78
ABCD3P28288 MTND4P16-201ENST00000466108 1367 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
ABCD3P28288 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
ABCD3P28288 AC006378.2-201ENST00000623178 2476 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
ABCD3P28288 AC105074.1-201ENST00000623380 3095 ntBASIC3.96□□□□□ -1.78
ABCD3P28288 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms