Protein–RNA interactions for Protein: P25940

COL5A3, Collagen alpha-3(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3P25940 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.99□□□□□ -1.93
COL5A3P25940 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.99□□□□□ -1.93
COL5A3P25940 RNU6-253P-201ENST00000384730 105 ntBASIC2.99□□□□□ -1.93
COL5A3P25940 RNU2-6P-201ENST00000411404 190 ntBASIC2.99□□□□□ -1.93
COL5A3P25940 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC2.99□□□□□ -1.93
COL5A3P25940 AC106872.3-201ENST00000495104 446 ntBASIC2.99□□□□□ -1.93
COL5A3P25940 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
COL5A3P25940 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC2.99□□□□□ -1.93
COL5A3P25940 CBX3P5-201ENST00000552017 521 ntBASIC2.99□□□□□ -1.93
COL5A3P25940 AL845331.3-202ENST00000562856 261 ntBASIC2.99□□□□□ -1.93
COL5A3P25940 EXOC5P1-201ENST00000510543 1969 ntBASIC2.99□□□□□ -1.93
COL5A3P25940 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
COL5A3P25940 RNA5SP239-201ENST00000410218 129 ntBASIC2.99□□□□□ -1.93
COL5A3P25940 AC103975.1-201ENST00000482506 483 ntBASIC2.99□□□□□ -1.93
COL5A3P25940 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC2.99□□□□□ -1.93
COL5A3P25940 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC2.99□□□□□ -1.93
COL5A3P25940 AC112673.1-201ENST00000513168 575 ntBASIC2.99□□□□□ -1.93
COL5A3P25940 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC2.99□□□□□ -1.93
COL5A3P25940 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.99□□□□□ -1.93
COL5A3P25940 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.99□□□□□ -1.93
COL5A3P25940 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.99□□□□□ -1.93
COL5A3P25940 AC006254.3-201ENST00000603353 884 ntBASIC2.99□□□□□ -1.93
COL5A3P25940 Z99496.1-201ENST00000469424 1477 ntBASIC2.98□□□□□ -1.93
COL5A3P25940 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
COL5A3P25940 ZNF355P-201ENST00000427301 3216 ntBASIC2.98□□□□□ -1.93
COL5A3P25940 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC2.98□□□□□ -1.93
COL5A3P25940 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.98□□□□□ -1.93
COL5A3P25940 RPS3AP26-201ENST00000398259 784 ntBASIC2.98□□□□□ -1.93
COL5A3P25940 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC2.98□□□□□ -1.93
COL5A3P25940 RPL23AP11-201ENST00000475260 469 ntBASIC2.98□□□□□ -1.93
COL5A3P25940 RPL23AP49-201ENST00000492925 468 ntBASIC2.98□□□□□ -1.93
COL5A3P25940 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.98□□□□□ -1.93
COL5A3P25940 NDUFB4P9-201ENST00000511646 388 ntBASIC2.98□□□□□ -1.93
COL5A3P25940 SNORA70.14-201ENST00000516205 110 ntBASIC2.98□□□□□ -1.93
COL5A3P25940 RANP3-201ENST00000530970 276 ntBASIC2.98□□□□□ -1.93
COL5A3P25940 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.98□□□□□ -1.93
COL5A3P25940 AC022884.3-201ENST00000579571 248 ntBASIC2.98□□□□□ -1.93
COL5A3P25940 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.98□□□□□ -1.93
COL5A3P25940 AL136981.2-201ENST00000617319 734 ntBASIC2.98□□□□□ -1.93
COL5A3P25940 MIR6766-201ENST00000622641 72 ntBASIC2.98□□□□□ -1.93
COL5A3P25940 MIR6873-201ENST00000622788 63 ntBASIC2.98□□□□□ -1.93
COL5A3P25940 AC099063.3-201ENST00000642066 185 ntBASIC2.98□□□□□ -1.93
COL5A3P25940 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.98□□□□□ -1.93
COL5A3P25940 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
COL5A3P25940 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC2.97□□□□□ -1.93
COL5A3P25940 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.97□□□□□ -1.93
COL5A3P25940 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
COL5A3P25940 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
COL5A3P25940 SNORA41-201ENST00000384675 132 ntBASIC2.97□□□□□ -1.93
COL5A3P25940 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
COL5A3P25940 GSTA9P-201ENST00000406231 611 ntBASIC2.97□□□□□ -1.93
COL5A3P25940 RNA5SP129-201ENST00000410276 118 ntBASIC2.97□□□□□ -1.93
COL5A3P25940 AL034379.1-201ENST00000423216 253 ntBASIC2.97□□□□□ -1.93
COL5A3P25940 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC2.97□□□□□ -1.93
COL5A3P25940 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.97□□□□□ -1.93
COL5A3P25940 Z98742.2-201ENST00000431564 187 ntBASIC2.97□□□□□ -1.93
COL5A3P25940 AL606490.7-201ENST00000433136 191 ntBASIC2.97□□□□□ -1.93
COL5A3P25940 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.97□□□□□ -1.93
COL5A3P25940 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC2.97□□□□□ -1.93
COL5A3P25940 POU5F1P7-201ENST00000508759 541 ntBASIC2.97□□□□□ -1.93
COL5A3P25940 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
COL5A3P25940 AP001207.1-201ENST00000524051 481 ntBASIC2.97□□□□□ -1.93
COL5A3P25940 AC123768.4-201ENST00000616244 701 ntBASIC2.97□□□□□ -1.93
COL5A3P25940 AC103798.2-201ENST00000624292 632 ntBASIC2.97□□□□□ -1.93
COL5A3P25940 SYT14P1-202ENST00000600441 1448 ntBASIC2.97□□□□□ -1.93
COL5A3P25940 AC090229.1-201ENST00000590983 1609 ntBASIC2.97□□□□□ -1.93
COL5A3P25940 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.97□□□□□ -1.93
COL5A3P25940 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
COL5A3P25940 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
COL5A3P25940 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
COL5A3P25940 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
COL5A3P25940 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.97□□□□□ -1.93
COL5A3P25940 ZNF542P-204ENST00000482727 1305 ntBASIC2.97□□□□□ -1.93
COL5A3P25940 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
COL5A3P25940 VN1R48P-201ENST00000448149 1036 ntBASIC2.96□□□□□ -1.93
COL5A3P25940 RPL21P18-201ENST00000469899 480 ntBASIC2.96□□□□□ -1.93
COL5A3P25940 AC104090.1-201ENST00000506341 1171 ntBASIC2.96□□□□□ -1.93
COL5A3P25940 AC107222.1-201ENST00000510899 637 ntBASIC2.96□□□□□ -1.93
COL5A3P25940 AC123904.3-201ENST00000547218 814 ntBASIC2.96□□□□□ -1.93
COL5A3P25940 AC107871.2-201ENST00000612894 502 ntBASIC2.96□□□□□ -1.93
COL5A3P25940 MIR6845-201ENST00000613182 61 ntBASIC2.96□□□□□ -1.93
COL5A3P25940 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC2.96□□□□□ -1.93
COL5A3P25940 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.96□□□□□ -1.94
COL5A3P25940 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL5A3P25940 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
COL5A3P25940 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
COL5A3P25940 Y_RNA.4-201ENST00000362333 112 ntBASIC2.96□□□□□ -1.94
COL5A3P25940 MTATP6P11-201ENST00000428071 670 ntBASIC2.96□□□□□ -1.94
COL5A3P25940 AP000893.1-201ENST00000474462 794 ntBASIC2.96□□□□□ -1.94
COL5A3P25940 AL024509.2-201ENST00000493462 493 ntBASIC2.96□□□□□ -1.94
COL5A3P25940 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC2.96□□□□□ -1.94
COL5A3P25940 AC015712.3-201ENST00000559380 164 ntBASIC2.96□□□□□ -1.94
COL5A3P25940 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.96□□□□□ -1.94
COL5A3P25940 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.96□□□□□ -1.94
COL5A3P25940 AC103710.2-201ENST00000609912 942 ntBASIC2.96□□□□□ -1.94
COL5A3P25940 PISRT1-201ENST00000626175 531 ntBASIC2.96□□□□□ -1.94
COL5A3P25940 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.96□□□□□ -1.94
COL5A3P25940 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC2.95□□□□□ -1.94
COL5A3P25940 AC097714.1-201ENST00000511272 1647 ntBASIC2.95□□□□□ -1.94
COL5A3P25940 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms