Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.65□□□□□ -1.82
VCLP18206 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.65□□□□□ -1.82
VCLP18206 AP001148.1-201ENST00000624124 2359 ntBASIC3.65□□□□□ -1.83
VCLP18206 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VCLP18206 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.65□□□□□ -1.83
VCLP18206 RNU2-42P-201ENST00000410697 113 ntBASIC3.65□□□□□ -1.83
VCLP18206 CRYBB2P1-203ENST00000415709 538 ntBASIC3.65□□□□□ -1.83
VCLP18206 RAD23BP2-201ENST00000416003 1207 ntBASIC3.65□□□□□ -1.83
VCLP18206 MRPS36P1-201ENST00000421291 307 ntBASIC3.65□□□□□ -1.83
VCLP18206 GTF2IP23-201ENST00000423746 351 ntBASIC3.65□□□□□ -1.83
VCLP18206 AC012497.1-201ENST00000429392 575 ntBASIC3.65□□□□□ -1.83
VCLP18206 TXNP1-201ENST00000441872 371 ntBASIC3.65□□□□□ -1.83
VCLP18206 RPS3AP46-201ENST00000448352 682 ntBASIC3.65□□□□□ -1.83
VCLP18206 AC010655.1-201ENST00000449336 292 ntBASIC3.65□□□□□ -1.83
VCLP18206 AC112492.1-201ENST00000449607 712 ntBASIC3.65□□□□□ -1.83
VCLP18206 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.65□□□□□ -1.83
VCLP18206 snoU13.24-201ENST00000458998 104 ntBASIC3.65□□□□□ -1.83
VCLP18206 RPL21P104-201ENST00000464143 478 ntBASIC3.65□□□□□ -1.83
VCLP18206 SNRPGP3-201ENST00000469405 227 ntBASIC3.65□□□□□ -1.83
VCLP18206 AC010285.1-201ENST00000470580 392 ntBASIC3.65□□□□□ -1.83
VCLP18206 AC108734.3-201ENST00000481241 1165 ntBASIC3.65□□□□□ -1.83
VCLP18206 AP002812.1-201ENST00000495378 474 ntBASIC3.65□□□□□ -1.83
VCLP18206 RPL21P131-201ENST00000497298 483 ntBASIC3.65□□□□□ -1.83
VCLP18206 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.65□□□□□ -1.83
VCLP18206 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.65□□□□□ -1.83
VCLP18206 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.65□□□□□ -1.83
VCLP18206 RN7SKP18-201ENST00000516005 275 ntBASIC3.65□□□□□ -1.83
VCLP18206 SNORA31.20-201ENST00000517111 133 ntBASIC3.65□□□□□ -1.83
VCLP18206 AC021451.1-201ENST00000523498 1129 ntBASIC3.65□□□□□ -1.83
VCLP18206 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.65□□□□□ -1.83
VCLP18206 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.65□□□□□ -1.83
VCLP18206 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.65□□□□□ -1.83
VCLP18206 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.65□□□□□ -1.83
VCLP18206 MIR3690-201ENST00000580266 75 ntBASIC3.65□□□□□ -1.83
VCLP18206 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.65□□□□□ -1.83
VCLP18206 AC021749.1-201ENST00000604322 607 ntBASIC3.65□□□□□ -1.83
VCLP18206 AC245389.1-201ENST00000605141 529 ntBASIC3.65□□□□□ -1.83
VCLP18206 AL121652.1-201ENST00000608851 448 ntBASIC3.65□□□□□ -1.83
VCLP18206 AL133445.2-201ENST00000611191 527 ntBASIC3.65□□□□□ -1.83
VCLP18206 AC040168.1-201ENST00000623594 991 ntBASIC3.65□□□□□ -1.83
VCLP18206 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.65□□□□□ -1.83
VCLP18206 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.65□□□□□ -1.83
VCLP18206 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.65□□□□□ -1.83
VCLP18206 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VCLP18206 OTUD4P1-201ENST00000237841 3067 ntBASIC3.65□□□□□ -1.83
VCLP18206 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.65□□□□□ -1.83
VCLP18206 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.65□□□□□ -1.83
VCLP18206 AL365440.1-201ENST00000436135 2167 ntBASIC3.65□□□□□ -1.83
VCLP18206 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
VCLP18206 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
VCLP18206 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VCLP18206 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.64□□□□□ -1.83
VCLP18206 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
VCLP18206 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VCLP18206 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
VCLP18206 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
VCLP18206 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.64□□□□□ -1.83
VCLP18206 U8.11-201ENST00000384699 133 ntBASIC3.64□□□□□ -1.83
VCLP18206 U8.12-201ENST00000384701 133 ntBASIC3.64□□□□□ -1.83
VCLP18206 ARF4P3-201ENST00000397387 509 ntBASIC3.64□□□□□ -1.83
VCLP18206 RPL21P17-201ENST00000397467 475 ntBASIC3.64□□□□□ -1.83
VCLP18206 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
VCLP18206 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.64□□□□□ -1.83
VCLP18206 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.64□□□□□ -1.83
VCLP18206 HMGB3P20-201ENST00000417997 600 ntBASIC3.64□□□□□ -1.83
VCLP18206 AL035423.1-201ENST00000420331 213 ntBASIC3.64□□□□□ -1.83
VCLP18206 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.64□□□□□ -1.83
VCLP18206 AC012065.2-201ENST00000421295 375 ntBASIC3.64□□□□□ -1.83
VCLP18206 RPL31P12-201ENST00000422587 358 ntBASIC3.64□□□□□ -1.83
VCLP18206 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.64□□□□□ -1.83
VCLP18206 SDR42E1P3-201ENST00000438345 502 ntBASIC3.64□□□□□ -1.83
VCLP18206 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.64□□□□□ -1.83
VCLP18206 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.64□□□□□ -1.83
VCLP18206 UBDP1-202ENST00000457888 382 ntBASIC3.64□□□□□ -1.83
VCLP18206 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.64□□□□□ -1.83
VCLP18206 SNORA84-201ENST00000459229 133 ntBASIC3.64□□□□□ -1.83
VCLP18206 U8.18-201ENST00000459285 133 ntBASIC3.64□□□□□ -1.83
VCLP18206 VN1R17P-201ENST00000472048 1090 ntBASIC3.64□□□□□ -1.83
VCLP18206 RPL23AP44-201ENST00000482216 473 ntBASIC3.64□□□□□ -1.83
VCLP18206 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.64□□□□□ -1.83
VCLP18206 OR4G11P-201ENST00000492842 939 ntBASIC3.64□□□□□ -1.83
VCLP18206 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.64□□□□□ -1.83
VCLP18206 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.64□□□□□ -1.83
VCLP18206 MTCYBP16-201ENST00000509187 1129 ntBASIC3.64□□□□□ -1.83
VCLP18206 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.64□□□□□ -1.83
VCLP18206 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.64□□□□□ -1.83
VCLP18206 NDUFB9P3-201ENST00000521269 501 ntBASIC3.64□□□□□ -1.83
VCLP18206 OR7E13P-201ENST00000526052 910 ntBASIC3.64□□□□□ -1.83
VCLP18206 OR4P1P-201ENST00000530808 1136 ntBASIC3.64□□□□□ -1.83
VCLP18206 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.64□□□□□ -1.83
VCLP18206 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.64□□□□□ -1.83
VCLP18206 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.64□□□□□ -1.83
VCLP18206 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.64□□□□□ -1.83
VCLP18206 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.64□□□□□ -1.83
VCLP18206 MIR1254-2-201ENST00000579553 63 ntBASIC3.64□□□□□ -1.83
VCLP18206 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.64□□□□□ -1.83
VCLP18206 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.64□□□□□ -1.83
VCLP18206 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.64□□□□□ -1.83
VCLP18206 AC024257.5-201ENST00000612739 531 ntBASIC3.64□□□□□ -1.83
VCLP18206 AL121772.2-201ENST00000614331 297 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms