Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 AC005000.2-201ENST00000605468 310 ntBASIC3.67□□□□□ -1.82
TOP1P11387 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.67□□□□□ -1.82
TOP1P11387 AC099506.2-201ENST00000623074 221 ntBASIC3.67□□□□□ -1.82
TOP1P11387 AC106730.3-201ENST00000624568 641 ntBASIC3.67□□□□□ -1.82
TOP1P11387 SEC63P2-201ENST00000503863 1939 ntBASIC3.67□□□□□ -1.82
TOP1P11387 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
TOP1P11387 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TOP1P11387 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.67□□□□□ -1.82
TOP1P11387 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
TOP1P11387 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.66□□□□□ -1.82
TOP1P11387 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
TOP1P11387 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
TOP1P11387 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.66□□□□□ -1.82
TOP1P11387 SNORD15B-201ENST00000384714 146 ntBASIC3.66□□□□□ -1.82
TOP1P11387 SNORA48.5-201ENST00000391143 135 ntBASIC3.66□□□□□ -1.82
TOP1P11387 AL583834.1-201ENST00000406943 343 ntBASIC3.66□□□□□ -1.82
TOP1P11387 RNU6-272P-201ENST00000411028 104 ntBASIC3.66□□□□□ -1.82
TOP1P11387 MTND4LP14-201ENST00000429447 288 ntBASIC3.66□□□□□ -1.82
TOP1P11387 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TOP1P11387 FABP5P3-201ENST00000437960 408 ntBASIC3.66□□□□□ -1.82
TOP1P11387 AC108734.1-201ENST00000439549 399 ntBASIC3.66□□□□□ -1.82
TOP1P11387 NECAP1P2-201ENST00000455668 727 ntBASIC3.66□□□□□ -1.82
TOP1P11387 ARPC3P2-201ENST00000457786 533 ntBASIC3.66□□□□□ -1.82
TOP1P11387 RPL27AP5-201ENST00000469428 449 ntBASIC3.66□□□□□ -1.82
TOP1P11387 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.66□□□□□ -1.82
TOP1P11387 PRDX3P4-201ENST00000470828 747 ntBASIC3.66□□□□□ -1.82
TOP1P11387 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TOP1P11387 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.66□□□□□ -1.82
TOP1P11387 RNA5SP468-201ENST00000516782 93 ntBASIC3.66□□□□□ -1.82
TOP1P11387 AC245166.1-201ENST00000521012 253 ntBASIC3.66□□□□□ -1.82
TOP1P11387 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.66□□□□□ -1.82
TOP1P11387 AF279873.1-201ENST00000523393 313 ntBASIC3.66□□□□□ -1.82
TOP1P11387 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.66□□□□□ -1.82
TOP1P11387 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.66□□□□□ -1.82
TOP1P11387 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.66□□□□□ -1.82
TOP1P11387 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.66□□□□□ -1.82
TOP1P11387 AC103881.1-201ENST00000603476 538 ntBASIC3.66□□□□□ -1.82
TOP1P11387 AC004775.1-201ENST00000607389 753 ntBASIC3.66□□□□□ -1.82
TOP1P11387 AC099778.2-201ENST00000610904 211 ntBASIC3.66□□□□□ -1.82
TOP1P11387 AL162233.1-201ENST00000620014 944 ntBASIC3.66□□□□□ -1.82
TOP1P11387 AF117829.1-206ENST00000621883 3802 ntBASIC3.66□□□□□ -1.82
TOP1P11387 AP003400.6-201ENST00000624698 740 ntBASIC3.66□□□□□ -1.82
TOP1P11387 AL109659.3-201ENST00000624985 950 ntBASIC3.66□□□□□ -1.82
TOP1P11387 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.66□□□□□ -1.82
TOP1P11387 AC092326.2-201ENST00000624772 1561 ntBASIC3.66□□□□□ -1.82
TOP1P11387 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TOP1P11387 ZNF833P-201ENST00000424938 1494 ntBASIC3.66□□□□□ -1.82
TOP1P11387 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.66□□□□□ -1.82
TOP1P11387 AC073055.1-201ENST00000456901 1621 ntBASIC3.66□□□□□ -1.82
TOP1P11387 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
TOP1P11387 AL353743.1-202ENST00000431724 1695 ntBASIC3.65□□□□□ -1.82
TOP1P11387 ZNF734P-201ENST00000419494 1534 ntBASIC3.65□□□□□ -1.82
TOP1P11387 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TOP1P11387 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TOP1P11387 MIR422A-201ENST00000362286 90 ntBASIC3.65□□□□□ -1.83
TOP1P11387 RNU6-50P-201ENST00000362356 103 ntBASIC3.65□□□□□ -1.83
TOP1P11387 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TOP1P11387 DEFB109C-201ENST00000382575 264 ntBASIC3.65□□□□□ -1.83
TOP1P11387 DEFB109B-201ENST00000382656 264 ntBASIC3.65□□□□□ -1.83
TOP1P11387 MIR128-1-201ENST00000384921 82 ntBASIC3.65□□□□□ -1.83
TOP1P11387 UBE2V1P11-201ENST00000411559 285 ntBASIC3.65□□□□□ -1.83
TOP1P11387 RPL32P35-201ENST00000415214 394 ntBASIC3.65□□□□□ -1.83
TOP1P11387 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.65□□□□□ -1.83
TOP1P11387 AC073310.1-201ENST00000423226 1033 ntBASIC3.65□□□□□ -1.83
TOP1P11387 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.65□□□□□ -1.83
TOP1P11387 AL590762.3-201ENST00000436372 640 ntBASIC3.65□□□□□ -1.83
TOP1P11387 RPS27P5-201ENST00000444247 244 ntBASIC3.65□□□□□ -1.83
TOP1P11387 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.65□□□□□ -1.83
TOP1P11387 MTND5P8-201ENST00000449817 1083 ntBASIC3.65□□□□□ -1.83
TOP1P11387 PTGES3P5-201ENST00000455109 434 ntBASIC3.65□□□□□ -1.83
TOP1P11387 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.65□□□□□ -1.83
TOP1P11387 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.83
TOP1P11387 RPS29P2-201ENST00000479278 136 ntBASIC3.65□□□□□ -1.83
TOP1P11387 DSTNP2-201ENST00000504533 515 ntBASIC3.65□□□□□ -1.83
TOP1P11387 AC008885.1-201ENST00000514930 301 ntBASIC3.65□□□□□ -1.83
TOP1P11387 AC104057.1-201ENST00000515547 497 ntBASIC3.65□□□□□ -1.83
TOP1P11387 OR8K2P-201ENST00000524645 927 ntBASIC3.65□□□□□ -1.83
TOP1P11387 PSMA2P1-201ENST00000526365 646 ntBASIC3.65□□□□□ -1.83
TOP1P11387 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.65□□□□□ -1.83
TOP1P11387 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC3.65□□□□□ -1.83
TOP1P11387 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.65□□□□□ -1.83
TOP1P11387 AC006539.2-201ENST00000601729 572 ntBASIC3.65□□□□□ -1.83
TOP1P11387 AL355802.4-201ENST00000607635 548 ntBASIC3.65□□□□□ -1.83
TOP1P11387 AC107294.3-201ENST00000609211 526 ntBASIC3.65□□□□□ -1.83
TOP1P11387 AL390240.1-201ENST00000612950 384 ntBASIC3.65□□□□□ -1.83
TOP1P11387 AC103798.2-201ENST00000624292 632 ntBASIC3.65□□□□□ -1.83
TOP1P11387 AC068620.4-201ENST00000636730 1182 ntBASIC3.65□□□□□ -1.83
TOP1P11387 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.65□□□□□ -1.83
TOP1P11387 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TOP1P11387 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
TOP1P11387 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TOP1P11387 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TOP1P11387 AC004925.1-201ENST00000624256 2706 ntBASIC3.64□□□□□ -1.83
TOP1P11387 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TOP1P11387 RNU6-1339P-201ENST00000363574 91 ntBASIC3.64□□□□□ -1.83
TOP1P11387 RNU6-883P-201ENST00000384597 107 ntBASIC3.64□□□□□ -1.83
TOP1P11387 MT-TC-201ENST00000387405 66 ntBASIC3.64□□□□□ -1.83
TOP1P11387 SNORA40.4-201ENST00000390971 128 ntBASIC3.64□□□□□ -1.83
TOP1P11387 RPL31P1-201ENST00000398116 372 ntBASIC3.64□□□□□ -1.83
TOP1P11387 SSXP10-201ENST00000402595 565 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms