Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 OR51AB1P-201ENST00000429046 620 ntBASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 NDUFB4P8-201ENST00000435351 367 ntBASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 IFNA20P-201ENST00000436840 528 ntBASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 ABCC13-202ENST00000463099 3842 ntBASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 TXNP6-201ENST00000510190 310 ntBASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 AC022360.1-201ENST00000521058 340 ntBASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 MIR4742-201ENST00000581069 85 ntBASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 AC009318.4-201ENST00000620496 486 ntBASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 AC097714.1-201ENST00000511272 1647 ntBASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 AL592148.3-201ENST00000608771 2646 ntBASIC6.75□□□□□ -1.33
CSB-PGBD3P0DP91 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 AC092447.10-201ENST00000620607 1652 ntBASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 RNU6-505P-201ENST00000384427 107 ntBASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 MIR298-201ENST00000401212 88 ntBASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 AL356421.1-201ENST00000403255 413 ntBASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 AC127391.1-201ENST00000411737 98 ntBASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 ELOCP4-201ENST00000420090 333 ntBASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 HMGB1P15-201ENST00000453854 435 ntBASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 MTND4P17-201ENST00000470444 350 ntBASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 AC011005.3-201ENST00000491624 395 ntBASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 AC026979.1-201ENST00000492525 396 ntBASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 IGKV1-32-201ENST00000519290 311 ntBASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 PSMA2P1-201ENST00000526365 646 ntBASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 AC018630.1-201ENST00000541376 925 ntBASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 ATP5J2P6-201ENST00000565203 266 ntBASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 AC018552.3-201ENST00000567416 561 ntBASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 AP005432.2-201ENST00000608162 586 ntBASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 AL133173.2-201ENST00000614270 90 ntBASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 AC006206.1-201ENST00000544842 3387 ntBASIC6.74□□□□□ -1.33
CSB-PGBD3P0DP91 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 AL031119.1-201ENST00000404707 1879 ntBASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 MTND4P35-201ENST00000604257 1375 ntBASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 RNU6-1158P-201ENST00000391167 107 ntBASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 RNU6-510P-201ENST00000391239 108 ntBASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 RPL36AP36-201ENST00000418616 301 ntBASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 RPL18P10-201ENST00000425606 538 ntBASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 AL590399.2-201ENST00000427536 309 ntBASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 AL590233.1-201ENST00000430017 456 ntBASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 AC093414.1-201ENST00000434712 514 ntBASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 GAPDHP14-201ENST00000450472 937 ntBASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 RNU6-1208P-201ENST00000459588 107 ntBASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 MTCO2P29-201ENST00000465212 189 ntBASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 RPS23P7-201ENST00000466210 444 ntBASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 AP001880.2-201ENST00000538233 448 ntBASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 MEG8-218ENST00000556720 456 ntTSL 3 BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 AC006270.2-201ENST00000578523 652 ntBASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 MIR5096-201ENST00000583713 70 ntBASIC6.73□□□□□ -1.33
CSB-PGBD3P0DP91 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms