Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC6P09630 HIGD1AP10-201ENST00000527837 282 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 AP001317.1-201ENST00000531194 960 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.25□□□□□ -1.73
HOXC6P09630 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.25□□□□□ -1.73
HOXC6P09630 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC6P09630 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXC6P09630 RPL21P12-201ENST00000559810 515 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.25□□□□□ -1.73
HOXC6P09630 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXC6P09630 VN1R88P-201ENST00000596787 292 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 AC005000.2-201ENST00000605468 310 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 AL591424.2-201ENST00000617023 128 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC6P09630 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXC6P09630 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.25□□□□□ -1.73
HOXC6P09630 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
HOXC6P09630 ASNSP1-201ENST00000518311 1939 ntBASIC4.25□□□□□ -1.73
HOXC6P09630 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC6P09630 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC6P09630 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
HOXC6P09630 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXC6P09630 AL365440.1-201ENST00000436135 2167 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 SLC10A5P1-201ENST00000379063 1306 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HOXC6P09630 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXC6P09630 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HOXC6P09630 U3.4-201ENST00000363352 213 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 AF274854.1-201ENST00000413236 615 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXC6P09630 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXC6P09630 DPRXP1-201ENST00000426312 460 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 MTCO3P30-201ENST00000426425 670 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXC6P09630 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.24□□□□□ -1.73
HOXC6P09630 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 ELOCP18-201ENST00000434209 337 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.24□□□□□ -1.73
HOXC6P09630 CYCSP32-201ENST00000440548 321 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC4.24□□□□□ -1.73
HOXC6P09630 RPL5P24-201ENST00000463742 885 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 RPL5P30-201ENST00000465511 891 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXC6P09630 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.24□□□□□ -1.73
HOXC6P09630 AC026784.1-201ENST00000507986 352 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXC6P09630 LTV1P1-201ENST00000510683 1237 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 GMPSP1-201ENST00000514075 579 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.24□□□□□ -1.73
HOXC6P09630 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXC6P09630 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.24□□□□□ -1.73
HOXC6P09630 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXC6P09630 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXC6P09630 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.24□□□□□ -1.73
HOXC6P09630 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXC6P09630 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXC6P09630 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.24□□□□□ -1.73
HOXC6P09630 AC022146.1-201ENST00000595307 847 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 AC078795.2-201ENST00000602835 1252 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 U73023.1-201ENST00000603134 700 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 AC010591.1-201ENST00000603941 649 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 AL592221.1-201ENST00000605266 382 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 AL021997.1-201ENST00000605757 193 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.24□□□□□ -1.73
HOXC6P09630 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
HOXC6P09630 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 AC073968.1-201ENST00000618594 637 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.24□□□□□ -1.73
HOXC6P09630 ATE1-AS1-202ENST00000636460 506 ntBASIC4.24□□□□□ -1.73
HOXC6P09630 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC4.24□□□□□ -1.73
HOXC6P09630 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
HOXC6P09630 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXC6P09630 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
HOXC6P09630 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
HOXC6P09630 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXC6P09630 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
HOXC6P09630 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
HOXC6P09630 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXC6P09630 RHOT1P2-201ENST00000366423 333 ntBASIC4.23□□□□□ -1.73
HOXC6P09630 MIR217-201ENST00000384817 110 ntBASIC4.23□□□□□ -1.73
HOXC6P09630 MIR16-1-201ENST00000385271 89 ntBASIC4.23□□□□□ -1.73
HOXC6P09630 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXC6P09630 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXC6P09630 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.23□□□□□ -1.73
HOXC6P09630 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC4.23□□□□□ -1.73
HOXC6P09630 MTCO3P21-201ENST00000430791 643 ntBASIC4.23□□□□□ -1.73
HOXC6P09630 AC073063.1-201ENST00000434352 607 ntBASIC4.23□□□□□ -1.73
HOXC6P09630 SNORA71B-202ENST00000439232 272 ntBASIC4.23□□□□□ -1.73
HOXC6P09630 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXC6P09630 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.23□□□□□ -1.73
HOXC6P09630 TPTE2P6-202ENST00000445572 1007 ntBASIC4.23□□□□□ -1.73
HOXC6P09630 MTCO2P25-201ENST00000447065 681 ntBASIC4.23□□□□□ -1.73
HOXC6P09630 OR6C5P-201ENST00000452388 923 ntBASIC4.23□□□□□ -1.73
HOXC6P09630 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.23□□□□□ -1.73
HOXC6P09630 KATNBL1P6-201ENST00000453433 915 ntBASIC4.23□□□□□ -1.73
HOXC6P09630 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXC6P09630 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.23□□□□□ -1.73
HOXC6P09630 BX248409.1-201ENST00000455497 255 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms