Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 SNORA40.3-201ENST00000390964 122 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 RPS3AP24-201ENST00000407896 734 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 RNU6-248P-201ENST00000410720 107 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 CYCSP19-201ENST00000411715 316 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 HMGN1P14-201ENST00000412459 517 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 RPL17P12-201ENST00000413391 526 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 ISCA1P1-201ENST00000426679 387 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 AL831737.1-201ENST00000441288 271 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 Z95327.1-201ENST00000446082 482 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DOAP06340 RAD23BP3-201ENST00000454157 1152 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 SNORA84-201ENST00000459229 133 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC012123.2-201ENST00000485809 248 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 PRDX4P1-201ENST00000507189 574 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC239860.2-201ENST00000525886 270 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC068993.1-201ENST00000546724 589 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 ADI1P3-201ENST00000549509 470 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 AL121579.1-201ENST00000555129 305 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC091489.2-201ENST00000566263 604 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC091135.1-201ENST00000585943 307 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC005255.1-201ENST00000593748 216 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 AL451044.1-201ENST00000604867 238 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC243654.2-201ENST00000612843 443 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC099669.2-201ENST00000616549 437 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 U4.5-201ENST00000617137 123 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC008785.1-201ENST00000624475 456 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DOAP06340 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DOAP06340 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
HLA-DOAP06340 Z95327.2-201ENST00000414579 1873 ntBASIC4.83□□□□□ -1.64
HLA-DOAP06340 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
HLA-DOAP06340 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DOAP06340 MAPK10-304ENST00000641341 3984 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DOAP06340 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
HLA-DOAP06340 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DOAP06340 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.82□□□□□ -1.64
HLA-DOAP06340 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
HLA-DOAP06340 Y_RNA.25-201ENST00000362528 102 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 Y_RNA.97-201ENST00000363094 102 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 SNORD35B-201ENST00000363660 87 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 RNU6-115P-201ENST00000364310 107 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 RNU4-12P-201ENST00000365233 139 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DOAP06340 AL359837.1-201ENST00000381357 287 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 RN7SKP159-201ENST00000410657 292 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 AL109913.1-201ENST00000421173 514 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 AL389915.1-201ENST00000422463 466 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DOAP06340 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DOAP06340 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DOAP06340 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DOAP06340 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DOAP06340 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DOAP06340 SNRPEP8-201ENST00000442866 260 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DOAP06340 AC098824.1-201ENST00000453565 980 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 RPS15AP1-201ENST00000457423 391 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 AC023424.2-201ENST00000493479 777 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 RNU6-513P-201ENST00000516104 104 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 RNU1-45P-201ENST00000517191 141 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 OR5M7P-201ENST00000526140 972 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DOAP06340 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.82□□□□□ -1.64
HLA-DOAP06340 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DOAP06340 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.82□□□□□ -1.64
HLA-DOAP06340 AC068714.1-201ENST00000559623 800 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 RPL23AP87-202ENST00000573039 466 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 AC136618.2-201ENST00000575091 400 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 AC110743.1-201ENST00000584870 478 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 AL592436.1-201ENST00000605135 558 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 AC092954.2-201ENST00000609103 430 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 MIR6868-201ENST00000611215 58 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 AL359535.1-201ENST00000612100 1087 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 AL121890.2-201ENST00000617644 465 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 AC092794.2-201ENST00000620933 563 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 AC138649.3-201ENST00000622154 254 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 AP001642.1-201ENST00000624727 2117 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 AC016588.2-201ENST00000632484 3021 ntBASIC4.82□□□□□ -1.64
HLA-DOAP06340 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
HLA-DOAP06340 AC093591.2-201ENST00000565254 3843 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms