Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 EXOSC3P1-201ENST00000448649 500 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 NPM1P13-201ENST00000452663 865 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 snoU109.3-201ENST00000459477 145 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 RPL23AP62-201ENST00000463396 453 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 AC078785.3-201ENST00000476607 425 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 AC006517.1-201ENST00000480485 328 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 GAPDHP39-201ENST00000481866 979 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 AC093663.1-201ENST00000497190 394 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.66□□□□□ -1.82
PDGFBP01127 AC027309.2-201ENST00000520566 192 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 IGLV3-26-201ENST00000520756 302 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 NDUFS5P6-201ENST00000529136 295 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.66□□□□□ -1.82
PDGFBP01127 UBE2NP1-201ENST00000545592 458 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC3.66□□□□□ -1.82
PDGFBP01127 AC087897.1-201ENST00000550134 156 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.66□□□□□ -1.82
PDGFBP01127 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.66□□□□□ -1.82
PDGFBP01127 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PDGFBP01127 AC091057.3-201ENST00000602684 733 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 GAS5-AS1-201ENST00000602767 694 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 RPAP2P1-201ENST00000603626 1168 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 AL157392.4-201ENST00000609756 345 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 AC092184.1-201ENST00000625042 715 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 AP000553.6-201ENST00000641242 118 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PDGFBP01127 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.66□□□□□ -1.82
PDGFBP01127 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PDGFBP01127 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PDGFBP01127 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PDGFBP01127 OTUD4P1-201ENST00000237841 3067 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
PDGFBP01127 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.66□□□□□ -1.82
PDGFBP01127 LINC02471-203ENST00000641941 4752 ntBASIC3.66□□□□□ -1.82
PDGFBP01127 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
PDGFBP01127 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
PDGFBP01127 AC106754.1-201ENST00000562632 1513 ntBASIC3.65□□□□□ -1.82
PDGFBP01127 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
PDGFBP01127 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.65□□□□□ -1.83
PDGFBP01127 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
PDGFBP01127 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
PDGFBP01127 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PDGFBP01127 RNU6-839P-201ENST00000363347 108 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 RNU6-224P-201ENST00000384055 107 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 RNU6-821P-201ENST00000390995 107 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 RNU4-78P-201ENST00000410940 126 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 RNA5SP39-201ENST00000411245 120 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.65□□□□□ -1.83
PDGFBP01127 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.65□□□□□ -1.83
PDGFBP01127 C1DP1-201ENST00000426049 402 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.65□□□□□ -1.83
PDGFBP01127 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.65□□□□□ -1.83
PDGFBP01127 RSL24D1P3-201ENST00000449255 495 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.65□□□□□ -1.83
PDGFBP01127 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.65□□□□□ -1.83
PDGFBP01127 AC010301.1-201ENST00000473936 355 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.65□□□□□ -1.83
PDGFBP01127 RPL21P13-201ENST00000488305 481 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.65□□□□□ -1.83
PDGFBP01127 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.65□□□□□ -1.83
PDGFBP01127 AC010376.1-201ENST00000522101 334 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.65□□□□□ -1.83
PDGFBP01127 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.65□□□□□ -1.83
PDGFBP01127 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PDGFBP01127 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.65□□□□□ -1.83
PDGFBP01127 AC044913.1-201ENST00000557200 430 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.65□□□□□ -1.83
PDGFBP01127 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.65□□□□□ -1.83
PDGFBP01127 MIR4509-3-201ENST00000578671 94 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 MIR4644-201ENST00000579929 84 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 MIR4509-2-201ENST00000583920 94 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 AC104984.5-201ENST00000586878 94 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 AC006023.1-201ENST00000603944 259 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 AC105148.1-201ENST00000604961 409 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 AL365400.2-201ENST00000605604 902 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 AP000238.1-201ENST00000608759 426 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 AP000240.1-201ENST00000609910 452 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 MIR4509-1-201ENST00000618224 94 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 AC007998.5-201ENST00000622938 237 ntBASIC3.65□□□□□ -1.83
PDGFBP01127 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.65□□□□□ -1.83
PDGFBP01127 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.65□□□□□ -1.83
PDGFBP01127 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PDGFBP01127 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.65□□□□□ -1.83
PDGFBP01127 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
PDGFBP01127 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PDGFBP01127 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.64□□□□□ -1.83
PDGFBP01127 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.64□□□□□ -1.83
PDGFBP01127 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDGFBP01127 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
PDGFBP01127 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
PDGFBP01127 RNU6-730P-201ENST00000383954 104 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 SNORD116-23-201ENST00000384645 92 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 MIR513A2-201ENST00000385249 127 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 RNA5SP424-201ENST00000390988 115 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 TOMM22P1-201ENST00000418578 312 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 OSTCP5-201ENST00000425293 453 ntBASIC3.64□□□□□ -1.83
PDGFBP01127 AC241584.1-201ENST00000438469 1241 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms