Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 RNA5SP385-201ENST00000515947 110 ntBASIC3.64□□□□□ -1.83
POLR1AO95602 AC007536.1-201ENST00000533382 349 ntBASIC3.64□□□□□ -1.83
POLR1AO95602 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.64□□□□□ -1.83
POLR1AO95602 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.64□□□□□ -1.83
POLR1AO95602 AP001004.1-201ENST00000582468 324 ntBASIC3.64□□□□□ -1.83
POLR1AO95602 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
POLR1AO95602 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
POLR1AO95602 FRG1BP-201ENST00000278882 761 ntBASIC3.63□□□□□ -1.83
POLR1AO95602 DYNLT3P1-201ENST00000378574 347 ntBASIC3.63□□□□□ -1.83
POLR1AO95602 RPL31P45-201ENST00000419532 356 ntBASIC3.63□□□□□ -1.83
POLR1AO95602 SAR1AP4-201ENST00000429225 591 ntBASIC3.63□□□□□ -1.83
POLR1AO95602 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
POLR1AO95602 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.63□□□□□ -1.83
POLR1AO95602 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
POLR1AO95602 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.63□□□□□ -1.83
POLR1AO95602 AC008277.2-201ENST00000605196 797 ntBASIC3.63□□□□□ -1.83
POLR1AO95602 AC073348.1-201ENST00000623002 331 ntBASIC3.63□□□□□ -1.83
POLR1AO95602 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
POLR1AO95602 AC084035.1-201ENST00000634543 607 ntBASIC3.63□□□□□ -1.83
POLR1AO95602 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.63□□□□□ -1.83
POLR1AO95602 EXOC5P1-201ENST00000510543 1969 ntBASIC3.63□□□□□ -1.83
POLR1AO95602 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
POLR1AO95602 AL021368.2-201ENST00000606125 5352 ntBASIC3.62□□□□□ -1.83
POLR1AO95602 Y_RNA.118-201ENST00000363300 101 ntBASIC3.62□□□□□ -1.83
POLR1AO95602 AC010928.3-201ENST00000587712 541 ntBASIC3.62□□□□□ -1.83
POLR1AO95602 NF1P10-201ENST00000613227 742 ntBASIC3.62□□□□□ -1.83
POLR1AO95602 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
POLR1AO95602 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
POLR1AO95602 RNU6-984P-201ENST00000363236 109 ntBASIC3.61□□□□□ -1.83
POLR1AO95602 RNU1-73P-201ENST00000383971 164 ntBASIC3.61□□□□□ -1.83
POLR1AO95602 AC007064.1-201ENST00000412238 351 ntBASIC3.61□□□□□ -1.83
POLR1AO95602 MORF4L1P6-201ENST00000418771 268 ntBASIC3.61□□□□□ -1.83
POLR1AO95602 MTND6P18-201ENST00000439477 513 ntBASIC3.61□□□□□ -1.83
POLR1AO95602 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.61□□□□□ -1.83
POLR1AO95602 RN7SKP24-201ENST00000515888 284 ntBASIC3.61□□□□□ -1.83
POLR1AO95602 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.61□□□□□ -1.83
POLR1AO95602 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.61□□□□□ -1.83
POLR1AO95602 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.61□□□□□ -1.83
POLR1AO95602 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.61□□□□□ -1.83
POLR1AO95602 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.61□□□□□ -1.83
POLR1AO95602 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
POLR1AO95602 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.61□□□□□ -1.83
POLR1AO95602 RPL9P6-201ENST00000492764 598 ntBASIC3.61□□□□□ -1.83
POLR1AO95602 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
POLR1AO95602 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.61□□□□□ -1.83
POLR1AO95602 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.61□□□□□ -1.83
POLR1AO95602 AL162233.1-201ENST00000620014 944 ntBASIC3.61□□□□□ -1.83
POLR1AO95602 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
POLR1AO95602 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
POLR1AO95602 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
POLR1AO95602 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC3.6□□□□□ -1.83
POLR1AO95602 AL592045.1-201ENST00000429867 352 ntBASIC3.6□□□□□ -1.83
POLR1AO95602 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
POLR1AO95602 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.6□□□□□ -1.83
POLR1AO95602 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.6□□□□□ -1.83
POLR1AO95602 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
POLR1AO95602 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.6□□□□□ -1.83
POLR1AO95602 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
POLR1AO95602 AC007423.1-201ENST00000605009 627 ntBASIC3.6□□□□□ -1.83
POLR1AO95602 AC103710.3-201ENST00000608157 948 ntBASIC3.6□□□□□ -1.83
POLR1AO95602 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
POLR1AO95602 RNU6-328P-201ENST00000390887 106 ntBASIC3.59□□□□□ -1.83
POLR1AO95602 RNA5SP210-201ENST00000391034 120 ntBASIC3.59□□□□□ -1.83
POLR1AO95602 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
POLR1AO95602 AL162578.1-201ENST00000406202 378 ntBASIC3.59□□□□□ -1.83
POLR1AO95602 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC3.59□□□□□ -1.83
POLR1AO95602 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.59□□□□□ -1.83
POLR1AO95602 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.59□□□□□ -1.83
POLR1AO95602 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
POLR1AO95602 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
POLR1AO95602 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
POLR1AO95602 RN7SKP44-201ENST00000363602 316 ntBASIC3.58□□□□□ -1.84
POLR1AO95602 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
POLR1AO95602 DHFRP5-201ENST00000406944 564 ntBASIC3.58□□□□□ -1.84
POLR1AO95602 AL513175.2-201ENST00000422071 443 ntBASIC3.58□□□□□ -1.84
POLR1AO95602 COX6CP2-201ENST00000444980 225 ntBASIC3.58□□□□□ -1.84
POLR1AO95602 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.58□□□□□ -1.84
POLR1AO95602 AC018630.1-201ENST00000541376 925 ntBASIC3.58□□□□□ -1.84
POLR1AO95602 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.58□□□□□ -1.84
POLR1AO95602 AP000942.3-201ENST00000603702 160 ntBASIC3.58□□□□□ -1.84
POLR1AO95602 GMCL1P2-201ENST00000605230 823 ntBASIC3.58□□□□□ -1.84
POLR1AO95602 AC009318.2-201ENST00000610917 651 ntBASIC3.58□□□□□ -1.84
POLR1AO95602 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
POLR1AO95602 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
POLR1AO95602 AC080128.1-201ENST00000474389 1917 ntBASIC3.58□□□□□ -1.84
POLR1AO95602 AC087565.3-202ENST00000642085 1603 ntBASIC3.58□□□□□ -1.84
POLR1AO95602 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
POLR1AO95602 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
POLR1AO95602 RPL21P71-201ENST00000465598 459 ntBASIC3.58□□□□□ -1.84
POLR1AO95602 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.58□□□□□ -1.84
POLR1AO95602 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.58□□□□□ -1.84
POLR1AO95602 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.58□□□□□ -1.84
POLR1AO95602 AC002076.2-201ENST00000617362 122 ntBASIC3.58□□□□□ -1.84
POLR1AO95602 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
POLR1AO95602 FAT1P1-201ENST00000406588 507 ntBASIC3.57□□□□□ -1.84
POLR1AO95602 Y_RNA.595-201ENST00000410403 105 ntBASIC3.57□□□□□ -1.84
POLR1AO95602 RPL36AP33-201ENST00000450395 310 ntBASIC3.57□□□□□ -1.84
POLR1AO95602 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.57□□□□□ -1.84
POLR1AO95602 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.57□□□□□ -1.84
POLR1AO95602 HMGB1P41-201ENST00000520234 440 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms