Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.69□□□□□ -1.34
RNF40O75150 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.69□□□□□ -1.34
RNF40O75150 AC093799.2-201ENST00000610062 578 ntBASIC6.69□□□□□ -1.34
RNF40O75150 MIR6862-1-201ENST00000613016 70 ntBASIC6.69□□□□□ -1.34
RNF40O75150 MIR6862-2-201ENST00000614755 70 ntBASIC6.69□□□□□ -1.34
RNF40O75150 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.69□□□□□ -1.34
RNF40O75150 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
RNF40O75150 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
RNF40O75150 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RNF40O75150 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF40O75150 AC022164.1-201ENST00000568767 2673 ntBASIC6.69□□□□□ -1.34
RNF40O75150 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
RNF40O75150 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
RNF40O75150 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.69□□□□□ -1.34
RNF40O75150 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
RNF40O75150 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
RNF40O75150 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.68□□□□□ -1.34
RNF40O75150 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF40O75150 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF40O75150 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF40O75150 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
RNF40O75150 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF40O75150 AC083837.1-201ENST00000565297 2994 ntBASIC6.68□□□□□ -1.34
RNF40O75150 AP002512.4-202ENST00000641599 4530 ntBASIC6.68□□□□□ -1.34
RNF40O75150 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF40O75150 AL359955.1-201ENST00000455242 3275 ntBASIC6.68□□□□□ -1.34
RNF40O75150 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF40O75150 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF40O75150 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF40O75150 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
RNF40O75150 Y_RNA.54-201ENST00000362766 105 ntBASIC6.68□□□□□ -1.34
RNF40O75150 RNU6-1266P-201ENST00000362794 105 ntBASIC6.68□□□□□ -1.34
RNF40O75150 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.68□□□□□ -1.34
RNF40O75150 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.68□□□□□ -1.34
RNF40O75150 AC096920.1-201ENST00000423991 241 ntBASIC6.68□□□□□ -1.34
RNF40O75150 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF40O75150 RPL23AP25-201ENST00000430973 463 ntBASIC6.68□□□□□ -1.34
RNF40O75150 RPL35AP22-201ENST00000436855 335 ntBASIC6.68□□□□□ -1.34
RNF40O75150 CEACAMP9-201ENST00000442990 513 ntBASIC6.68□□□□□ -1.34
RNF40O75150 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.68□□□□□ -1.34
RNF40O75150 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC6.68□□□□□ -1.34
RNF40O75150 RNU6-1278P-201ENST00000516130 107 ntBASIC6.68□□□□□ -1.34
RNF40O75150 RNU6-346P-201ENST00000516288 111 ntBASIC6.68□□□□□ -1.34
RNF40O75150 AL133399.1-201ENST00000527476 298 ntBASIC6.68□□□□□ -1.34
RNF40O75150 AC127381.1-201ENST00000555979 939 ntBASIC6.68□□□□□ -1.34
RNF40O75150 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF40O75150 AL138895.2-201ENST00000603019 178 ntBASIC6.68□□□□□ -1.34
RNF40O75150 NANOGP3-201ENST00000605855 286 ntBASIC6.68□□□□□ -1.34
RNF40O75150 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF40O75150 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.68□□□□□ -1.34
RNF40O75150 AC000095.2-202ENST00000637415 154 ntBASIC6.68□□□□□ -1.34
RNF40O75150 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF40O75150 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF40O75150 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF40O75150 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.68□□□□□ -1.34
RNF40O75150 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
RNF40O75150 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.68□□□□□ -1.34
RNF40O75150 AL359893.1-201ENST00000447628 1580 ntBASIC6.68□□□□□ -1.34
RNF40O75150 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.68□□□□□ -1.34
RNF40O75150 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF40O75150 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
RNF40O75150 CASC19-246ENST00000641625 1606 ntBASIC6.68□□□□□ -1.34
RNF40O75150 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
RNF40O75150 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF40O75150 AC232271.1-201ENST00000602455 2715 ntBASIC6.68□□□□□ -1.34
RNF40O75150 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
RNF40O75150 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
RNF40O75150 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RNF40O75150 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
RNF40O75150 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
RNF40O75150 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.67□□□□□ -1.34
RNF40O75150 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
RNF40O75150 BIN2P1-201ENST00000504996 1530 ntBASIC6.67□□□□□ -1.34
RNF40O75150 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RNF40O75150 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RNF40O75150 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
RNF40O75150 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RNF40O75150 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
RNF40O75150 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
RNF40O75150 RN7SKP275-201ENST00000364626 301 ntBASIC6.67□□□□□ -1.34
RNF40O75150 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.67□□□□□ -1.34
RNF40O75150 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
RNF40O75150 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.67□□□□□ -1.34
RNF40O75150 AC022022.1-201ENST00000430304 178 ntBASIC6.67□□□□□ -1.34
RNF40O75150 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.67□□□□□ -1.34
RNF40O75150 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.67□□□□□ -1.34
RNF40O75150 RPL29P29-201ENST00000448725 423 ntBASIC6.67□□□□□ -1.34
RNF40O75150 RN7SL221P-201ENST00000466190 281 ntBASIC6.67□□□□□ -1.34
RNF40O75150 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.67□□□□□ -1.34
RNF40O75150 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC6.67□□□□□ -1.34
RNF40O75150 RNU7-200P-201ENST00000516105 62 ntBASIC6.67□□□□□ -1.34
RNF40O75150 SCARNA5-201ENST00000516201 276 ntBASIC6.67□□□□□ -1.34
RNF40O75150 RNU6-911P-201ENST00000516523 104 ntBASIC6.67□□□□□ -1.34
RNF40O75150 DEFB108E-201ENST00000524692 240 ntBASIC6.67□□□□□ -1.34
RNF40O75150 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.67□□□□□ -1.34
RNF40O75150 CBX3P8-201ENST00000532412 525 ntBASIC6.67□□□□□ -1.34
RNF40O75150 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.67□□□□□ -1.34
RNF40O75150 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.67□□□□□ -1.34
RNF40O75150 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
RNF40O75150 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms