Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 AC091805.2-201ENST00000603848 235 ntBASIC3.87□□□□□ -1.79
LDB3O75112 AL451044.1-201ENST00000604867 238 ntBASIC3.87□□□□□ -1.79
LDB3O75112 AC024560.3-201ENST00000608482 349 ntBASIC3.87□□□□□ -1.79
LDB3O75112 AP001521.1-201ENST00000609150 300 ntBASIC3.87□□□□□ -1.79
LDB3O75112 AC069234.5-201ENST00000611056 416 ntBASIC3.87□□□□□ -1.79
LDB3O75112 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.87□□□□□ -1.79
LDB3O75112 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.87□□□□□ -1.79
LDB3O75112 AC127502.3-201ENST00000636170 1206 ntBASIC3.87□□□□□ -1.79
LDB3O75112 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
LDB3O75112 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
LDB3O75112 LINC00561-201ENST00000565815 2738 ntBASIC3.87□□□□□ -1.79
LDB3O75112 PABPC1P9-201ENST00000426076 1612 ntBASIC3.87□□□□□ -1.79
LDB3O75112 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
LDB3O75112 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LDB3O75112 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
LDB3O75112 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.87□□□□□ -1.79
LDB3O75112 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.87□□□□□ -1.79
LDB3O75112 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.87□□□□□ -1.79
LDB3O75112 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
LDB3O75112 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.86□□□□□ -1.79
LDB3O75112 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LDB3O75112 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LDB3O75112 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LDB3O75112 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.86□□□□□ -1.79
LDB3O75112 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LDB3O75112 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LDB3O75112 SNRPEP3-201ENST00000338402 276 ntBASIC3.86□□□□□ -1.79
LDB3O75112 RNY4P24-201ENST00000362735 96 ntBASIC3.86□□□□□ -1.79
LDB3O75112 RNU6-984P-201ENST00000363236 109 ntBASIC3.86□□□□□ -1.79
LDB3O75112 Y_RNA.248-201ENST00000364501 109 ntBASIC3.86□□□□□ -1.79
LDB3O75112 SNORA70.2-201ENST00000364506 135 ntBASIC3.86□□□□□ -1.79
LDB3O75112 RNA5SP513-201ENST00000364648 118 ntBASIC3.86□□□□□ -1.79
LDB3O75112 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.86□□□□□ -1.79
LDB3O75112 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LDB3O75112 RNU6-921P-201ENST00000384361 107 ntBASIC3.86□□□□□ -1.79
LDB3O75112 SNORA37-201ENST00000384504 129 ntBASIC3.86□□□□□ -1.79
LDB3O75112 SNORA70C-201ENST00000384538 135 ntBASIC3.86□□□□□ -1.79
LDB3O75112 RNU6-441P-201ENST00000384545 106 ntBASIC3.86□□□□□ -1.79
LDB3O75112 RNY3P10-201ENST00000384764 102 ntBASIC3.86□□□□□ -1.79
LDB3O75112 AC007066.1-201ENST00000392902 381 ntBASIC3.86□□□□□ -1.79
LDB3O75112 RPS26P8-201ENST00000393490 348 ntBASIC3.86□□□□□ -1.79
LDB3O75112 RAB28P1-201ENST00000411517 641 ntBASIC3.86□□□□□ -1.79
LDB3O75112 MTCYBP38-201ENST00000417160 1123 ntBASIC3.86□□□□□ -1.79
LDB3O75112 NIPA2P1-201ENST00000426223 976 ntBASIC3.86□□□□□ -1.79
LDB3O75112 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LDB3O75112 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.86□□□□□ -1.79
LDB3O75112 RPS4XP4-201ENST00000443195 763 ntBASIC3.86□□□□□ -1.79
LDB3O75112 COX6CP12-201ENST00000446748 202 ntBASIC3.86□□□□□ -1.79
LDB3O75112 NANOGNBP1-201ENST00000448444 480 ntBASIC3.86□□□□□ -1.79
LDB3O75112 AC093392.2-201ENST00000450682 337 ntBASIC3.86□□□□□ -1.79
LDB3O75112 RPL26P28-201ENST00000451325 435 ntBASIC3.86□□□□□ -1.79
LDB3O75112 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.86□□□□□ -1.79
LDB3O75112 MTCO3P2-201ENST00000457365 171 ntBASIC3.86□□□□□ -1.79
LDB3O75112 RPL36AP13-201ENST00000457490 317 ntBASIC3.86□□□□□ -1.79
LDB3O75112 OR9M1P-201ENST00000459641 921 ntBASIC3.86□□□□□ -1.79
LDB3O75112 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.86□□□□□ -1.79
LDB3O75112 RN7SL585P-201ENST00000470538 280 ntBASIC3.86□□□□□ -1.79
LDB3O75112 AC006517.1-201ENST00000480485 328 ntBASIC3.86□□□□□ -1.79
LDB3O75112 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC3.86□□□□□ -1.79
LDB3O75112 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.86□□□□□ -1.79
LDB3O75112 OR4G11P-201ENST00000492842 939 ntBASIC3.86□□□□□ -1.79
LDB3O75112 AC108078.3-201ENST00000502633 489 ntBASIC3.86□□□□□ -1.79
LDB3O75112 AC006499.5-201ENST00000505037 514 ntBASIC3.86□□□□□ -1.79
LDB3O75112 SNX5P1-201ENST00000505757 1041 ntBASIC3.86□□□□□ -1.79
LDB3O75112 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.86□□□□□ -1.79
LDB3O75112 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.86□□□□□ -1.79
LDB3O75112 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LDB3O75112 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LDB3O75112 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LDB3O75112 RNU6-583P-201ENST00000516012 92 ntBASIC3.86□□□□□ -1.79
LDB3O75112 RN7SKP234-201ENST00000517173 224 ntBASIC3.86□□□□□ -1.79
LDB3O75112 AC025881.1-201ENST00000518851 512 ntBASIC3.86□□□□□ -1.79
LDB3O75112 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.86□□□□□ -1.79
LDB3O75112 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.86□□□□□ -1.79
LDB3O75112 AL389895.1-201ENST00000554127 252 ntBASIC3.86□□□□□ -1.79
LDB3O75112 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.86□□□□□ -1.79
LDB3O75112 PARP1P2-201ENST00000556806 195 ntBASIC3.86□□□□□ -1.79
LDB3O75112 ZNF519P3-201ENST00000557158 1032 ntBASIC3.86□□□□□ -1.79
LDB3O75112 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC3.86□□□□□ -1.79
LDB3O75112 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.86□□□□□ -1.79
LDB3O75112 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.86□□□□□ -1.79
LDB3O75112 OR4G1P-201ENST00000588632 938 ntBASIC3.86□□□□□ -1.79
LDB3O75112 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.86□□□□□ -1.79
LDB3O75112 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LDB3O75112 AL591034.3-201ENST00000605511 685 ntBASIC3.86□□□□□ -1.79
LDB3O75112 HSPE1P14-201ENST00000605812 302 ntBASIC3.86□□□□□ -1.79
LDB3O75112 AC007684.1-201ENST00000609671 477 ntBASIC3.86□□□□□ -1.79
LDB3O75112 AC105429.2-201ENST00000610567 517 ntBASIC3.86□□□□□ -1.79
LDB3O75112 AC023043.4-201ENST00000612081 449 ntBASIC3.86□□□□□ -1.79
LDB3O75112 MIR7844-201ENST00000616161 122 ntBASIC3.86□□□□□ -1.79
LDB3O75112 AC099669.2-201ENST00000616549 437 ntBASIC3.86□□□□□ -1.79
LDB3O75112 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
LDB3O75112 SAGE4P-201ENST00000442271 3381 ntBASIC3.86□□□□□ -1.79
LDB3O75112 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LDB3O75112 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
LDB3O75112 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC3.85□□□□□ -1.79
LDB3O75112 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LDB3O75112 AC117529.2-201ENST00000512159 2068 ntBASIC3.85□□□□□ -1.79
LDB3O75112 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
LDB3O75112 AC092447.7-201ENST00000422212 1621 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms