Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.65□□□□□ -1.83
PRKNO60260 AC022790.1-201ENST00000522872 204 ntBASIC3.65□□□□□ -1.83
PRKNO60260 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.65□□□□□ -1.83
PRKNO60260 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.65□□□□□ -1.83
PRKNO60260 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.65□□□□□ -1.83
PRKNO60260 AC008127.2-201ENST00000549925 1075 ntBASIC3.65□□□□□ -1.83
PRKNO60260 LSM6P2-201ENST00000552208 177 ntBASIC3.65□□□□□ -1.83
PRKNO60260 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.65□□□□□ -1.83
PRKNO60260 GTF2IP22-201ENST00000554443 182 ntBASIC3.65□□□□□ -1.83
PRKNO60260 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.65□□□□□ -1.83
PRKNO60260 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.65□□□□□ -1.83
PRKNO60260 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.65□□□□□ -1.83
PRKNO60260 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PRKNO60260 AC004987.4-201ENST00000603383 338 ntBASIC3.65□□□□□ -1.83
PRKNO60260 BNIP3P11-201ENST00000603878 563 ntBASIC3.65□□□□□ -1.83
PRKNO60260 AC092354.1-201ENST00000606057 376 ntBASIC3.65□□□□□ -1.83
PRKNO60260 MIR7844-201ENST00000616161 122 ntBASIC3.65□□□□□ -1.83
PRKNO60260 AL591424.2-201ENST00000617023 128 ntBASIC3.65□□□□□ -1.83
PRKNO60260 MIR6864-201ENST00000617935 70 ntBASIC3.65□□□□□ -1.83
PRKNO60260 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.65□□□□□ -1.83
PRKNO60260 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.65□□□□□ -1.83
PRKNO60260 FP236240.3-201ENST00000623061 327 ntBASIC3.65□□□□□ -1.83
PRKNO60260 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.65□□□□□ -1.83
PRKNO60260 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
PRKNO60260 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
PRKNO60260 AC027290.2-201ENST00000623210 18662 ntBASIC3.65□□□□□ -1.83
PRKNO60260 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.65□□□□□ -1.83
PRKNO60260 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.65□□□□□ -1.83
PRKNO60260 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
PRKNO60260 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PRKNO60260 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PRKNO60260 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PRKNO60260 AL079343.1-201ENST00000572358 1771 ntBASIC3.64□□□□□ -1.83
PRKNO60260 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PRKNO60260 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PRKNO60260 RNU4-21P-201ENST00000362802 126 ntBASIC3.64□□□□□ -1.83
PRKNO60260 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.64□□□□□ -1.83
PRKNO60260 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PRKNO60260 RNU6-723P-201ENST00000383973 107 ntBASIC3.64□□□□□ -1.83
PRKNO60260 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PRKNO60260 SNORA3C-201ENST00000408792 125 ntBASIC3.64□□□□□ -1.83
PRKNO60260 RNA5SP306-201ENST00000411087 107 ntBASIC3.64□□□□□ -1.83
PRKNO60260 RN7SKP142-201ENST00000411236 328 ntBASIC3.64□□□□□ -1.83
PRKNO60260 RPS3AP9-201ENST00000417027 792 ntBASIC3.64□□□□□ -1.83
PRKNO60260 RPL36AP36-201ENST00000418616 301 ntBASIC3.64□□□□□ -1.83
PRKNO60260 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.64□□□□□ -1.83
PRKNO60260 Z97055.1-201ENST00000419730 712 ntBASIC3.64□□□□□ -1.83
PRKNO60260 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
PRKNO60260 RPL30P3-201ENST00000424262 333 ntBASIC3.64□□□□□ -1.83
PRKNO60260 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.64□□□□□ -1.83
PRKNO60260 UBE2FP3-201ENST00000436366 524 ntBASIC3.64□□□□□ -1.83
PRKNO60260 LARP1BP3-201ENST00000437229 869 ntBASIC3.64□□□□□ -1.83
PRKNO60260 AC083863.1-201ENST00000438811 231 ntBASIC3.64□□□□□ -1.83
PRKNO60260 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC3.64□□□□□ -1.83
PRKNO60260 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.64□□□□□ -1.83
PRKNO60260 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.64□□□□□ -1.83
PRKNO60260 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.64□□□□□ -1.83
PRKNO60260 OR9M1P-201ENST00000459641 921 ntBASIC3.64□□□□□ -1.83
PRKNO60260 AC097493.1-201ENST00000463958 372 ntBASIC3.64□□□□□ -1.83
PRKNO60260 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.64□□□□□ -1.83
PRKNO60260 AC146944.2-203ENST00000502493 354 ntBASIC3.64□□□□□ -1.83
PRKNO60260 AC139495.1-202ENST00000513164 354 ntBASIC3.64□□□□□ -1.83
PRKNO60260 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.64□□□□□ -1.83
PRKNO60260 AC022695.1-201ENST00000522089 237 ntBASIC3.64□□□□□ -1.83
PRKNO60260 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.64□□□□□ -1.83
PRKNO60260 OR5M7P-201ENST00000526140 972 ntBASIC3.64□□□□□ -1.83
PRKNO60260 ZNF705CP-201ENST00000530515 889 ntBASIC3.64□□□□□ -1.83
PRKNO60260 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.64□□□□□ -1.83
PRKNO60260 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.64□□□□□ -1.83
PRKNO60260 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.64□□□□□ -1.83
PRKNO60260 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC3.64□□□□□ -1.83
PRKNO60260 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.64□□□□□ -1.83
PRKNO60260 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.64□□□□□ -1.83
PRKNO60260 GNRHR2P1-201ENST00000555315 631 ntBASIC3.64□□□□□ -1.83
PRKNO60260 HSPE1P5-201ENST00000561489 272 ntBASIC3.64□□□□□ -1.83
PRKNO60260 AL133457.1-201ENST00000564251 987 ntBASIC3.64□□□□□ -1.83
PRKNO60260 MTCYBP28-201ENST00000566728 1132 ntBASIC3.64□□□□□ -1.83
PRKNO60260 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.64□□□□□ -1.83
PRKNO60260 LARP7P2-201ENST00000575306 125 ntBASIC3.64□□□□□ -1.83
PRKNO60260 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.64□□□□□ -1.83
PRKNO60260 AC008507.1-201ENST00000587506 734 ntBASIC3.64□□□□□ -1.83
PRKNO60260 RNU6-88P-201ENST00000606801 100 ntBASIC3.64□□□□□ -1.83
PRKNO60260 AC103591.3-201ENST00000608684 209 ntBASIC3.64□□□□□ -1.83
PRKNO60260 AC090425.2-201ENST00000608818 501 ntBASIC3.64□□□□□ -1.83
PRKNO60260 OR6R2P-201ENST00000609216 300 ntBASIC3.64□□□□□ -1.83
PRKNO60260 AC099669.2-201ENST00000616549 437 ntBASIC3.64□□□□□ -1.83
PRKNO60260 AC018816.2-201ENST00000621460 353 ntBASIC3.64□□□□□ -1.83
PRKNO60260 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
PRKNO60260 AC090582.1-201ENST00000636321 199 ntBASIC3.64□□□□□ -1.83
PRKNO60260 AC006927.3-201ENST00000638789 384 ntBASIC3.64□□□□□ -1.83
PRKNO60260 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PRKNO60260 AP002001.2-201ENST00000529025 1469 ntBASIC3.64□□□□□ -1.83
PRKNO60260 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
PRKNO60260 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.64□□□□□ -1.83
PRKNO60260 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.64□□□□□ -1.83
PRKNO60260 CR383658.2-201ENST00000547576 1525 ntBASIC3.64□□□□□ -1.83
PRKNO60260 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PRKNO60260 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PRKNO60260 MFSD8-236ENST00000641509 4050 ntBASIC3.64□□□□□ -1.83
PRKNO60260 MTND4P26-201ENST00000415971 1359 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms