Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PRPF3O43395 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
PRPF3O43395 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PRPF3O43395 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
PRPF3O43395 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PRPF3O43395 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
PRPF3O43395 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF3O43395 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF3O43395 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF3O43395 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.83□□□□□ -1.64
PRPF3O43395 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
PRPF3O43395 MTND4P26-201ENST00000415971 1359 ntBASIC4.83□□□□□ -1.64
PRPF3O43395 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
PRPF3O43395 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF3O43395 Y_RNA.318-201ENST00000365131 97 ntBASIC4.83□□□□□ -1.64
PRPF3O43395 RNU6-744P-201ENST00000365557 107 ntBASIC4.83□□□□□ -1.64
PRPF3O43395 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF3O43395 RNU6-1316P-201ENST00000384242 108 ntBASIC4.83□□□□□ -1.64
PRPF3O43395 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.83□□□□□ -1.64
PRPF3O43395 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.83□□□□□ -1.64
PRPF3O43395 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.83□□□□□ -1.64
PRPF3O43395 RAD23BP3-201ENST00000454157 1152 ntBASIC4.83□□□□□ -1.64
PRPF3O43395 RPS4XP10-201ENST00000465034 731 ntBASIC4.83□□□□□ -1.64
PRPF3O43395 AL024509.2-201ENST00000493462 493 ntBASIC4.83□□□□□ -1.64
PRPF3O43395 AC080014.1-201ENST00000496877 1201 ntBASIC4.83□□□□□ -1.64
PRPF3O43395 OR2A20P-203ENST00000498397 1268 ntBASIC4.83□□□□□ -1.64
PRPF3O43395 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.83□□□□□ -1.64
PRPF3O43395 AC093824.1-201ENST00000508796 343 ntBASIC4.83□□□□□ -1.64
PRPF3O43395 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.83□□□□□ -1.64
PRPF3O43395 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.83□□□□□ -1.64
PRPF3O43395 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.83□□□□□ -1.64
PRPF3O43395 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.83□□□□□ -1.64
PRPF3O43395 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.83□□□□□ -1.64
PRPF3O43395 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.83□□□□□ -1.64
PRPF3O43395 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.83□□□□□ -1.64
PRPF3O43395 MIR378J-201ENST00000611988 109 ntBASIC4.83□□□□□ -1.64
PRPF3O43395 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.83□□□□□ -1.64
PRPF3O43395 AC025048.6-202ENST00000627667 438 ntBASIC4.83□□□□□ -1.64
PRPF3O43395 OR52H1-202ENST00000641796 1061 ntBASIC4.83□□□□□ -1.64
PRPF3O43395 AC244517.1-201ENST00000606030 2086 ntBASIC4.83□□□□□ -1.64
PRPF3O43395 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
PRPF3O43395 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
PRPF3O43395 LINC01355-201ENST00000566551 5444 ntBASIC4.83□□□□□ -1.64
PRPF3O43395 AC068254.2-201ENST00000623938 3577 ntBASIC4.83□□□□□ -1.64
PRPF3O43395 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
PRPF3O43395 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PRPF3O43395 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PRPF3O43395 NEAT1-202ENST00000501122 22743 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PRPF3O43395 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PRPF3O43395 OR11H4-201ENST00000315409 1082 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 OR52B1P-201ENST00000316506 909 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PRPF3O43395 RNU4-21P-201ENST00000362802 126 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 SNORA37-201ENST00000384504 129 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 AL356421.1-201ENST00000403255 413 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.82□□□□□ -1.64
PRPF3O43395 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.82□□□□□ -1.64
PRPF3O43395 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.82□□□□□ -1.64
PRPF3O43395 RPL23AP46-201ENST00000438548 490 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 LSM1P1-201ENST00000438629 273 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 NUTF2P3-201ENST00000448540 384 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 OR6K1P-201ENST00000456766 971 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 MTCO2P18-201ENST00000457151 658 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 AC010618.1-201ENST00000469924 477 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 RN7SL585P-201ENST00000470538 280 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.82□□□□□ -1.64
PRPF3O43395 AF213884.1-201ENST00000488102 463 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 AC026979.1-201ENST00000492525 396 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 RPS27AP13-201ENST00000498403 237 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 AC083829.1-201ENST00000503756 657 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.82□□□□□ -1.64
PRPF3O43395 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.82□□□□□ -1.64
PRPF3O43395 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.82□□□□□ -1.64
PRPF3O43395 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC4.82□□□□□ -1.64
PRPF3O43395 AC013828.2-201ENST00000532487 235 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PRPF3O43395 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
PRPF3O43395 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.82□□□□□ -1.64
PRPF3O43395 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.82□□□□□ -1.64
PRPF3O43395 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.82□□□□□ -1.64
PRPF3O43395 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.82□□□□□ -1.64
PRPF3O43395 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.82□□□□□ -1.64
PRPF3O43395 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.82□□□□□ -1.64
PRPF3O43395 AC022655.2-201ENST00000577280 318 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 AC023575.1-201ENST00000580510 358 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 RN7SL600P-201ENST00000581811 299 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 MIR544B-201ENST00000582372 78 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 MIR3939-201ENST00000582614 106 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.82□□□□□ -1.64
PRPF3O43395 AC068276.1-201ENST00000605793 379 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 MIR6758-201ENST00000620653 63 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 AC040168.1-201ENST00000623594 991 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 AC008785.1-201ENST00000624475 456 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 AC092192.1-201ENST00000633154 1018 ntBASIC4.82□□□□□ -1.64
PRPF3O43395 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PRPF3O43395 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC4.82□□□□□ -1.64
PRPF3O43395 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PRPF3O43395 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PRPF3O43395 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms