Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SMAD9O15198 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SMAD9O15198 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SMAD9O15198 RNU6-28P-201ENST00000362378 107 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC3.78□□□□□ -1.8
SMAD9O15198 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMAD9O15198 SNORA70C-201ENST00000384538 135 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 MIR93-201ENST00000385024 80 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SMAD9O15198 MIR320C1-201ENST00000408566 88 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 MIR1179-201ENST00000408703 91 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 RPS23P10-201ENST00000416185 486 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.78□□□□□ -1.8
SMAD9O15198 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.78□□□□□ -1.8
SMAD9O15198 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.78□□□□□ -1.8
SMAD9O15198 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.78□□□□□ -1.8
SMAD9O15198 BTF3P10-201ENST00000433415 495 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.78□□□□□ -1.8
SMAD9O15198 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.78□□□□□ -1.8
SMAD9O15198 UBE2FP3-201ENST00000436366 524 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.78□□□□□ -1.8
SMAD9O15198 AL138799.3-201ENST00000438968 350 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.78□□□□□ -1.8
SMAD9O15198 NPM1P49-201ENST00000448027 714 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.78□□□□□ -1.8
SMAD9O15198 PAXBP1P1-201ENST00000449315 447 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.78□□□□□ -1.8
SMAD9O15198 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.78□□□□□ -1.8
SMAD9O15198 CEACAMP4-201ENST00000457676 421 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 AC079804.1-201ENST00000461922 436 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 RPL30P6-201ENST00000475925 342 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 AC017015.1-201ENST00000477387 286 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 RPS29P19-201ENST00000479709 171 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 RPS3AP43-201ENST00000479743 781 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 AC105137.1-201ENST00000484355 562 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 AC023424.2-201ENST00000493479 777 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.78□□□□□ -1.8
SMAD9O15198 SLC25A15P5-201ENST00000508033 253 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 MTND5P4-201ENST00000514978 288 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 AC093853.1-201ENST00000515689 483 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 CYCSP29-201ENST00000533731 318 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 OR6C7P-201ENST00000547875 934 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 CYP4A43P-201ENST00000568156 121 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 AC135628.1-201ENST00000568867 534 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.78□□□□□ -1.8
SMAD9O15198 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 AC090616.5-202ENST00000582111 297 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 AC010928.3-201ENST00000587712 541 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.78□□□□□ -1.8
SMAD9O15198 AC121247.2-201ENST00000604776 136 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 AC010738.1-201ENST00000604970 987 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 AL357080.1-201ENST00000617394 239 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC3.78□□□□□ -1.8
SMAD9O15198 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 AC091925.2-201ENST00000625059 256 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 PCMTD1P7-201ENST00000634506 357 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 AC099063.3-201ENST00000642066 185 ntBASIC3.78□□□□□ -1.8
SMAD9O15198 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
SMAD9O15198 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMAD9O15198 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SMAD9O15198 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.81
SMAD9O15198 AL031985.3-201ENST00000565390 2449 ntBASIC3.78□□□□□ -1.81
SMAD9O15198 LARP1BP1-201ENST00000506036 1359 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SMAD9O15198 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.77□□□□□ -1.81
SMAD9O15198 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.77□□□□□ -1.81
SMAD9O15198 RNU6-433P-201ENST00000363216 104 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 RNU6-777P-201ENST00000364265 104 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
SMAD9O15198 RNU6-837P-201ENST00000391056 108 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 SNORA57.1-201ENST00000391227 145 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 RNA5SP104-201ENST00000410989 118 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 AC009518.2-201ENST00000418056 731 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 TOMM22P1-201ENST00000418578 312 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 AL391219.1-201ENST00000422570 483 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 RPL23AP38-201ENST00000423801 469 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.77□□□□□ -1.81
SMAD9O15198 AC006548.1-201ENST00000427470 102 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 COX6B1P7-201ENST00000430845 235 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.77□□□□□ -1.81
SMAD9O15198 AC002381.1-201ENST00000447049 280 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 NUTF2P3-201ENST00000448540 384 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 HMGB1P15-201ENST00000453854 435 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 ANP32BP2-201ENST00000454525 545 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SMAD9O15198 BTF3P5-201ENST00000457252 467 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 snoU13.3-201ENST00000459441 104 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 AP001992.1-205ENST00000462248 379 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 RPS4XP10-201ENST00000465034 731 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.77□□□□□ -1.81
SMAD9O15198 AC106872.2-201ENST00000494303 480 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 BNIP3P41-201ENST00000503774 571 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.77□□□□□ -1.81
SMAD9O15198 AC006390.1-201ENST00000508068 283 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.77□□□□□ -1.81
SMAD9O15198 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SMAD9O15198 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.77□□□□□ -1.81
SMAD9O15198 AP003730.1-201ENST00000524605 285 ntBASIC3.77□□□□□ -1.81
SMAD9O15198 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms