Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ATP2A1O14983 AC090337.1-201ENST00000579651 2074 ntBASIC4.17□□□□□ -1.74
ATP2A1O14983 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ATP2A1O14983 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.16□□□□□ -1.74
ATP2A1O14983 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ATP2A1O14983 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
ATP2A1O14983 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ATP2A1O14983 RNU6-621P-201ENST00000364752 109 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 RNA5SP267-201ENST00000364893 126 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.16□□□□□ -1.74
ATP2A1O14983 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ATP2A1O14983 RNU6-157P-201ENST00000383957 107 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 Y_RNA.408-201ENST00000383987 102 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 MIR506-201ENST00000384998 124 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 MTHFD2P2-201ENST00000407725 247 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ATP2A1O14983 VPS26BP1-201ENST00000417155 755 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 AC006960.1-201ENST00000419980 153 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.16□□□□□ -1.74
ATP2A1O14983 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.16□□□□□ -1.74
ATP2A1O14983 AC096632.1-201ENST00000427395 310 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC4.16□□□□□ -1.74
ATP2A1O14983 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.16□□□□□ -1.74
ATP2A1O14983 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.16□□□□□ -1.74
ATP2A1O14983 RPS3AP12-201ENST00000443616 753 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ATP2A1O14983 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.16□□□□□ -1.74
ATP2A1O14983 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.16□□□□□ -1.74
ATP2A1O14983 DSTNP2-201ENST00000504533 515 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.16□□□□□ -1.74
ATP2A1O14983 AC005798.1-201ENST00000513715 387 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 MTND2P26-201ENST00000528255 1029 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 UBTFL10-201ENST00000528532 562 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 PDCL2P2-201ENST00000533651 189 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.16□□□□□ -1.74
ATP2A1O14983 TRAV15-201ENST00000556680 249 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.16□□□□□ -1.74
ATP2A1O14983 AL031985.2-201ENST00000600955 480 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 HSPE1P14-201ENST00000605812 302 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 HMGB1P50-201ENST00000605814 607 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 AP000484.1-201ENST00000620067 1252 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 AL732618.1-201ENST00000623251 301 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 AC117529.2-201ENST00000512159 2068 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 AL356489.2-201ENST00000566968 3528 ntBASIC4.16□□□□□ -1.74
ATP2A1O14983 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
ATP2A1O14983 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
ATP2A1O14983 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
ATP2A1O14983 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
ATP2A1O14983 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATP2A1O14983 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
ATP2A1O14983 Y_RNA.25-201ENST00000362528 102 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 RNU1-33P-201ENST00000364249 162 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
ATP2A1O14983 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
ATP2A1O14983 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.15□□□□□ -1.75
ATP2A1O14983 MIR649-201ENST00000384843 97 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.15□□□□□ -1.75
ATP2A1O14983 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.15□□□□□ -1.75
ATP2A1O14983 RAC1P3-201ENST00000416129 580 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 CYP4F29P-201ENST00000420685 446 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.15□□□□□ -1.75
ATP2A1O14983 AL158156.1-201ENST00000422509 473 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ATP2A1O14983 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.15□□□□□ -1.75
ATP2A1O14983 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.15□□□□□ -1.75
ATP2A1O14983 MTND1P32-201ENST00000433043 938 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 AF228730.2-201ENST00000438784 848 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 MTND1P26-201ENST00000440488 538 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.15□□□□□ -1.75
ATP2A1O14983 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.15□□□□□ -1.75
ATP2A1O14983 AC010655.1-201ENST00000449336 292 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 AC007967.1-201ENST00000455422 1159 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 AC099563.1-201ENST00000456086 418 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.15□□□□□ -1.75
ATP2A1O14983 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.15□□□□□ -1.75
ATP2A1O14983 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.15□□□□□ -1.75
ATP2A1O14983 IGLVIV-53-201ENST00000520107 367 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC4.15□□□□□ -1.75
ATP2A1O14983 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.15□□□□□ -1.75
ATP2A1O14983 DUXAP1-201ENST00000556632 463 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 SULT1C2P1-202ENST00000562418 459 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 AGGF1P8-201ENST00000562979 1000 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.15□□□□□ -1.75
ATP2A1O14983 SNORD39.3-201ENST00000584451 71 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 DPRXP5-201ENST00000604662 539 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 AC006077.1-201ENST00000604746 343 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 AC113194.1-201ENST00000606037 500 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 AC131235.4-201ENST00000609288 620 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.15□□□□□ -1.75
ATP2A1O14983 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ATP2A1O14983 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.15□□□□□ -1.75
ATP2A1O14983 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.15□□□□□ -1.75
ATP2A1O14983 FAM157B-203ENST00000639350 358 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 CDR1-202ENST00000625883 1485 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 MFSD8-236ENST00000641509 4050 ntBASIC4.15□□□□□ -1.75
ATP2A1O14983 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
ATP2A1O14983 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATP2A1O14983 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.15□□□□□ -1.75
ATP2A1O14983 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
ATP2A1O14983 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms