Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC5.14□□□□□ -1.59
RFXAPO00287 AL049839.1-201ENST00000556151 657 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.14□□□□□ -1.59
RFXAPO00287 MIR548Y-201ENST00000582739 110 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.14□□□□□ -1.59
RFXAPO00287 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.14□□□□□ -1.59
RFXAPO00287 AC019193.3-201ENST00000609144 554 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 AC023043.4-201ENST00000612081 449 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 DISC2.1-201ENST00000612827 205 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 AC084781.2-201ENST00000615568 161 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.14□□□□□ -1.59
RFXAPO00287 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RFXAPO00287 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
RFXAPO00287 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFXAPO00287 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.14□□□□□ -1.59
RFXAPO00287 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFXAPO00287 AC010266.2-201ENST00000564741 3255 ntBASIC5.14□□□□□ -1.59
RFXAPO00287 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFXAPO00287 AP001350.1-201ENST00000601906 1524 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
RFXAPO00287 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFXAPO00287 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFXAPO00287 MAPK10-328ENST00000641553 4009 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.13□□□□□ -1.59
RFXAPO00287 SNRPEP3-201ENST00000338402 276 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 RN7SKP185-201ENST00000362813 326 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFXAPO00287 RNA5SP187-201ENST00000384400 119 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 MIR670-201ENST00000390142 98 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 SNORD115.1-201ENST00000391109 76 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 RNA5SP105-201ENST00000391123 113 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFXAPO00287 RNU6-373P-201ENST00000411247 98 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.13□□□□□ -1.59
RFXAPO00287 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.13□□□□□ -1.59
RFXAPO00287 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.13□□□□□ -1.59
RFXAPO00287 HMGN2P27-201ENST00000427352 270 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 RPL34P6-201ENST00000432390 345 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 AC138761.5-201ENST00000433967 325 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 OR4C10P-201ENST00000434991 931 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.13□□□□□ -1.59
RFXAPO00287 AC000111.2-201ENST00000448200 210 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 CACYBPP2-201ENST00000453625 678 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 NF1P3-201ENST00000457709 450 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC5.13□□□□□ -1.59
RFXAPO00287 AC233702.1-201ENST00000482905 502 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.13□□□□□ -1.59
RFXAPO00287 AC026782.1-201ENST00000512952 449 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 RNU6-1220P-201ENST00000517126 108 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 OR5D2P-201ENST00000524390 911 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFXAPO00287 AC018630.1-201ENST00000541376 925 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.13□□□□□ -1.59
RFXAPO00287 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC5.13□□□□□ -1.59
RFXAPO00287 MIR3149-201ENST00000584629 83 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.13□□□□□ -1.59
RFXAPO00287 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 AC008782.1-201ENST00000603386 430 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 AC080078.3-201ENST00000605407 463 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 AL080274.1-201ENST00000605565 220 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 AC087588.2-201ENST00000617667 426 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 AC009237.17-201ENST00000618111 748 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 AP000843.1-201ENST00000624880 701 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 RNA5SP196-201ENST00000625967 102 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFXAPO00287 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFXAPO00287 NUP58P1-201ENST00000502546 1738 ntBASIC5.13□□□□□ -1.59
RFXAPO00287 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFXAPO00287 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFXAPO00287 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.13□□□□□ -1.59
RFXAPO00287 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
RFXAPO00287 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFXAPO00287 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFXAPO00287 AL031595.2-201ENST00000624215 19071 ntBASIC5.12□□□□□ -1.59
RFXAPO00287 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFXAPO00287 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFXAPO00287 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.12□□□□□ -1.59
RFXAPO00287 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
RFXAPO00287 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.12□□□□□ -1.59
RFXAPO00287 AC025574.1-201ENST00000554784 1653 ntBASIC5.12□□□□□ -1.59
RFXAPO00287 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
RFXAPO00287 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFXAPO00287 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.12□□□□□ -1.59
RFXAPO00287 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFXAPO00287 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFXAPO00287 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
RFXAPO00287 AL442639.1-201ENST00000625030 1899 ntBASIC5.12□□□□□ -1.59
RFXAPO00287 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
RFXAPO00287 Y_RNA.193-201ENST00000363979 102 ntBASIC5.12□□□□□ -1.59
RFXAPO00287 RN7SKP224-201ENST00000364140 325 ntBASIC5.12□□□□□ -1.59
RFXAPO00287 Y_RNA.401-201ENST00000383965 117 ntBASIC5.12□□□□□ -1.59
RFXAPO00287 RNU2-9P-201ENST00000410194 145 ntBASIC5.12□□□□□ -1.59
RFXAPO00287 AC127391.1-201ENST00000411737 98 ntBASIC5.12□□□□□ -1.59
RFXAPO00287 GPS2P1-201ENST00000411761 986 ntBASIC5.12□□□□□ -1.59
RFXAPO00287 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC5.12□□□□□ -1.59
RFXAPO00287 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.12□□□□□ -1.59
RFXAPO00287 AC009238.2-201ENST00000431026 355 ntBASIC5.12□□□□□ -1.59
RFXAPO00287 RSU1P2-202ENST00000437884 485 ntBASIC5.12□□□□□ -1.59
RFXAPO00287 AL450023.3-201ENST00000440592 271 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms