Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SRRM4A7MD48 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
SRRM4A7MD48 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 HSPE1P26-201ENST00000405341 275 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 RPS15AP38-201ENST00000413110 372 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 TXNL1P1-201ENST00000429528 554 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC087650.1-201ENST00000431445 468 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 RPL7P34-201ENST00000433316 712 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 ATP5HP2-201ENST00000433885 485 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 SETP8-201ENST00000435341 628 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 MTND2P22-201ENST00000444325 1033 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 MTND1P9-201ENST00000453775 944 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 Z82190.1-201ENST00000454534 490 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 snoU13.4-201ENST00000458916 104 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC004263.1-201ENST00000479327 332 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC092451.1-201ENST00000480211 153 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 AL024509.2-201ENST00000493462 493 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC023424.2-201ENST00000493479 777 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 AP001086.1-201ENST00000494882 321 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC104685.1-201ENST00000502445 371 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC026726.1-201ENST00000512859 601 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 MTCO2P32-201ENST00000514865 403 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 IGHV3-32-201ENST00000519182 355 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 COX6CP8-201ENST00000522620 226 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 OR6C7P-201ENST00000547875 934 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 CR383656.7-201ENST00000548164 174 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC126177.3-201ENST00000551839 688 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC006254.3-201ENST00000603353 884 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 DUXAP11-201ENST00000603858 526 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 AL451086.1-201ENST00000605596 223 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 AL390208.1-201ENST00000605885 644 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 AL451064.1-201ENST00000607718 471 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC090425.2-201ENST00000608818 501 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 TUG1_1.1-201ENST00000610654 145 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SRRM4A7MD48 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SRRM4A7MD48 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SRRM4A7MD48 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.21□□□□□ -1.9
SRRM4A7MD48 AL031985.3-201ENST00000565390 2449 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
SRRM4A7MD48 AC012321.1-201ENST00000561622 1588 ntBASIC3.21□□□□□ -1.9
SRRM4A7MD48 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SRRM4A7MD48 LINC02471-203ENST00000641941 4752 ntBASIC3.2□□□□□ -1.9
SRRM4A7MD48 AL022578.1-201ENST00000439330 1433 ntBASIC3.2□□□□□ -1.9
SRRM4A7MD48 BDP1P-201ENST00000582658 1990 ntBASIC3.2□□□□□ -1.9
SRRM4A7MD48 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SRRM4A7MD48 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SRRM4A7MD48 AC126755.2-208ENST00000327792 462 ntBASIC3.2□□□□□ -1.9
SRRM4A7MD48 AC138969.1-213ENST00000331436 462 ntBASIC3.2□□□□□ -1.9
SRRM4A7MD48 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
SRRM4A7MD48 OR5H2-201ENST00000355273 945 ntBASIC3.2□□□□□ -1.9
SRRM4A7MD48 RNU6-50P-201ENST00000362356 103 ntBASIC3.2□□□□□ -1.9
SRRM4A7MD48 RNU6-600P-201ENST00000362524 99 ntBASIC3.2□□□□□ -1.9
SRRM4A7MD48 RNA5SP399-201ENST00000364003 117 ntBASIC3.2□□□□□ -1.9
SRRM4A7MD48 RNU6-359P-201ENST00000365466 108 ntBASIC3.2□□□□□ -1.9
SRRM4A7MD48 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.2□□□□□ -1.9
SRRM4A7MD48 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
SRRM4A7MD48 SNORA56-201ENST00000383966 129 ntBASIC3.2□□□□□ -1.9
SRRM4A7MD48 RNU6-629P-201ENST00000384061 103 ntBASIC3.2□□□□□ -1.9
SRRM4A7MD48 RNU6-253P-201ENST00000384730 105 ntBASIC3.2□□□□□ -1.9
SRRM4A7MD48 RNU6-952P-201ENST00000391164 108 ntBASIC3.2□□□□□ -1.9
SRRM4A7MD48 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.2□□□□□ -1.9
SRRM4A7MD48 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.2□□□□□ -1.9
SRRM4A7MD48 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.2□□□□□ -1.9
SRRM4A7MD48 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms