Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 MTCYBP23-201ENST00000558717 1102 ntBASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 AC006557.5-201ENST00000603126 811 ntBASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 AC024220.1-201ENST00000603675 484 ntBASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 MTND3P19-201ENST00000603825 345 ntBASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 AL513477.2-201ENST00000607858 568 ntBASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 AC106052.1-201ENST00000608029 497 ntBASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 AC090425.2-201ENST00000608818 501 ntBASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 U1.23-201ENST00000610293 146 ntBASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 RNU1-68P-201ENST00000615382 146 ntBASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 AC009159.2-201ENST00000617603 606 ntBASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 AC068722.2-201ENST00000618734 544 ntBASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 U1.39-201ENST00000621562 146 ntBASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 AC104985.3-201ENST00000623479 597 ntBASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 AP000770.2-201ENST00000623694 100 ntBASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 ZNF849P-201ENST00000594711 1566 ntBASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 AC116096.1-201ENST00000566804 2314 ntBASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
TRIM49BA6NDI0 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.65□□□□□ -1.82
TRIM49BA6NDI0 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.65□□□□□ -1.82
TRIM49BA6NDI0 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM49BA6NDI0 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM49BA6NDI0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
TRIM49BA6NDI0 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM49BA6NDI0 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.65□□□□□ -1.82
TRIM49BA6NDI0 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM49BA6NDI0 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.65□□□□□ -1.82
TRIM49BA6NDI0 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
TRIM49BA6NDI0 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 Y_RNA.472-201ENST00000384322 102 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 MIR490-201ENST00000384865 128 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 TMSB4XP8-201ENST00000402089 135 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 RNU2-71P-201ENST00000411395 189 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 OR51A3P-201ENST00000413596 924 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 TMSB4XP6-201ENST00000415187 135 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 SSR1P2-201ENST00000415208 787 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 HSFY4P-201ENST00000415994 1181 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 USP9YP21-201ENST00000420603 432 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 AC069157.1-201ENST00000421749 137 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 TMSB4XP1-201ENST00000424567 135 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 ISCA1P2-201ENST00000438679 421 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 OR51B8P-201ENST00000449892 769 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 snoU13.22-201ENST00000459428 104 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 RPL23AP62-201ENST00000463396 453 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 RPS4XP13-201ENST00000483219 789 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 AC114322.1-201ENST00000506771 926 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 IGKV2D-23-201ENST00000518179 286 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 AC010376.1-201ENST00000522101 334 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 IGKV2D-19-201ENST00000523346 262 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 OR8I1P-201ENST00000529291 931 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 AC004024.1-201ENST00000549244 247 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 AC087897.1-201ENST00000550134 156 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 AL132857.1-201ENST00000555180 708 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 AC012182.1-201ENST00000570133 895 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 AC013468.1-201ENST00000608680 598 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 AC000367.1-201ENST00000452711 1766 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 AP001350.1-201ENST00000601906 1524 ntBASIC3.65□□□□□ -1.83
TRIM49BA6NDI0 MTND5P31-201ENST00000419366 1374 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 RPL7P26-201ENST00000333817 754 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 RNU6-353P-201ENST00000364266 108 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 RNVU1-3-201ENST00000364313 161 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 MIR449B-201ENST00000384995 97 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 MIR218-2-201ENST00000385006 110 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 RNU6-932P-201ENST00000391108 106 ntBASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
TRIM49BA6NDI0 RNA5SP44-201ENST00000410446 133 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms