Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
AP4S1Q9Y587 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
AP4S1Q9Y587 ZNF720P1-201ENST00000562403 1939 ntBASIC2.31□□□□□ -2.04
AP4S1Q9Y587 AL139276.1-201ENST00000311910 1001 ntBASIC2.31□□□□□ -2.04
AP4S1Q9Y587 RPS4XP7-201ENST00000406274 780 ntBASIC2.31□□□□□ -2.04
AP4S1Q9Y587 AL158825.1-201ENST00000414735 521 ntBASIC2.31□□□□□ -2.04
AP4S1Q9Y587 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.31□□□□□ -2.04
AP4S1Q9Y587 ATG3P1-201ENST00000419507 911 ntBASIC2.31□□□□□ -2.04
AP4S1Q9Y587 FNDC3CP-201ENST00000420795 1155 ntBASIC2.31□□□□□ -2.04
AP4S1Q9Y587 SUMO1P4-201ENST00000429430 302 ntBASIC2.31□□□□□ -2.04
AP4S1Q9Y587 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.31□□□□□ -2.04
AP4S1Q9Y587 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
AP4S1Q9Y587 RPL23AP58-201ENST00000440453 469 ntBASIC2.31□□□□□ -2.04
AP4S1Q9Y587 AC135721.1-201ENST00000497954 479 ntBASIC2.31□□□□□ -2.04
AP4S1Q9Y587 SNORD59.2-201ENST00000516873 68 ntBASIC2.31□□□□□ -2.04
AP4S1Q9Y587 RNU4-60P-201ENST00000517239 135 ntBASIC2.31□□□□□ -2.04
AP4S1Q9Y587 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.31□□□□□ -2.04
AP4S1Q9Y587 OR4U1P-201ENST00000554958 912 ntBASIC2.31□□□□□ -2.04
AP4S1Q9Y587 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC2.31□□□□□ -2.04
AP4S1Q9Y587 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.31□□□□□ -2.04
AP4S1Q9Y587 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.31□□□□□ -2.04
AP4S1Q9Y587 HSPE1P14-201ENST00000605812 302 ntBASIC2.31□□□□□ -2.04
AP4S1Q9Y587 AC034236.3-201ENST00000605999 461 ntBASIC2.31□□□□□ -2.04
AP4S1Q9Y587 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.31□□□□□ -2.04
AP4S1Q9Y587 AL645568.2-201ENST00000432815 1337 ntBASIC2.31□□□□□ -2.04
AP4S1Q9Y587 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.31□□□□□ -2.04
AP4S1Q9Y587 PABPC1P9-201ENST00000426076 1612 ntBASIC2.31□□□□□ -2.04
AP4S1Q9Y587 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.31□□□□□ -2.04
AP4S1Q9Y587 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.31□□□□□ -2.04
AP4S1Q9Y587 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
AP4S1Q9Y587 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
AP4S1Q9Y587 SNORD62.1-201ENST00000362541 86 ntBASIC2.3□□□□□ -2.04
AP4S1Q9Y587 RNA5SP374-201ENST00000362939 125 ntBASIC2.3□□□□□ -2.04
AP4S1Q9Y587 SNORA38.1-201ENST00000364172 131 ntBASIC2.3□□□□□ -2.04
AP4S1Q9Y587 MIR9-1-201ENST00000385198 89 ntBASIC2.3□□□□□ -2.04
AP4S1Q9Y587 FO393413.1-201ENST00000402892 195 ntBASIC2.3□□□□□ -2.04
AP4S1Q9Y587 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.3□□□□□ -2.04
AP4S1Q9Y587 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.3□□□□□ -2.04
AP4S1Q9Y587 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.3□□□□□ -2.04
AP4S1Q9Y587 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.3□□□□□ -2.04
AP4S1Q9Y587 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.3□□□□□ -2.04
AP4S1Q9Y587 AC069277.2-201ENST00000454211 432 ntBASIC2.3□□□□□ -2.04
AP4S1Q9Y587 AL136126.1-201ENST00000473603 402 ntBASIC2.3□□□□□ -2.04
AP4S1Q9Y587 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
AP4S1Q9Y587 TRBV8-1-201ENST00000481590 279 ntBASIC2.3□□□□□ -2.04
AP4S1Q9Y587 RPL7L1P13-201ENST00000511702 739 ntBASIC2.3□□□□□ -2.04
AP4S1Q9Y587 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.3□□□□□ -2.04
AP4S1Q9Y587 RNU6-711P-201ENST00000517255 106 ntBASIC2.3□□□□□ -2.04
AP4S1Q9Y587 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.3□□□□□ -2.04
AP4S1Q9Y587 AL121603.1-201ENST00000553815 142 ntBASIC2.3□□□□□ -2.04
AP4S1Q9Y587 AC009163.5-201ENST00000575421 637 ntBASIC2.3□□□□□ -2.04
AP4S1Q9Y587 AC245128.3-201ENST00000594721 748 ntBASIC2.3□□□□□ -2.04
AP4S1Q9Y587 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC2.3□□□□□ -2.04
AP4S1Q9Y587 YPEL5P2-201ENST00000605553 359 ntBASIC2.3□□□□□ -2.04
AP4S1Q9Y587 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.3□□□□□ -2.04
AP4S1Q9Y587 ATP5A1P2-202ENST00000616464 443 ntBASIC2.3□□□□□ -2.04
AP4S1Q9Y587 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.3□□□□□ -2.04
AP4S1Q9Y587 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.3□□□□□ -2.04
AP4S1Q9Y587 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC2.3□□□□□ -2.04
AP4S1Q9Y587 AP000526.1-201ENST00000603308 1388 ntBASIC2.3□□□□□ -2.04
AP4S1Q9Y587 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
AP4S1Q9Y587 AC087565.3-202ENST00000642085 1603 ntBASIC2.29□□□□□ -2.04
AP4S1Q9Y587 AC093536.2-201ENST00000565257 1406 ntBASIC2.29□□□□□ -2.04
AP4S1Q9Y587 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC2.29□□□□□ -2.04
AP4S1Q9Y587 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
AP4S1Q9Y587 AL356057.2-201ENST00000403318 432 ntBASIC2.29□□□□□ -2.04
AP4S1Q9Y587 METTL5-204ENST00000409340 472 ntTSL 5 BASIC2.29□□□□□ -2.04
AP4S1Q9Y587 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.29□□□□□ -2.04
AP4S1Q9Y587 MORF4L1P6-201ENST00000418771 268 ntBASIC2.29□□□□□ -2.04
AP4S1Q9Y587 RPL35AP12-201ENST00000425362 338 ntBASIC2.29□□□□□ -2.04
AP4S1Q9Y587 RPS24P8-201ENST00000431490 402 ntBASIC2.29□□□□□ -2.04
AP4S1Q9Y587 AC006994.1-201ENST00000438212 839 ntBASIC2.29□□□□□ -2.04
AP4S1Q9Y587 RPL17P49-201ENST00000443728 411 ntBASIC2.29□□□□□ -2.04
AP4S1Q9Y587 NECAP1P2-201ENST00000455668 727 ntBASIC2.29□□□□□ -2.04
AP4S1Q9Y587 AC093663.2-201ENST00000484625 313 ntBASIC2.29□□□□□ -2.04
AP4S1Q9Y587 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC2.29□□□□□ -2.04
AP4S1Q9Y587 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.29□□□□□ -2.04
AP4S1Q9Y587 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.29□□□□□ -2.04
AP4S1Q9Y587 IGLV3-17-201ENST00000519099 244 ntBASIC2.29□□□□□ -2.04
AP4S1Q9Y587 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC2.29□□□□□ -2.04
AP4S1Q9Y587 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.29□□□□□ -2.04
AP4S1Q9Y587 AP000790.1-201ENST00000528891 737 ntBASIC2.29□□□□□ -2.04
AP4S1Q9Y587 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.29□□□□□ -2.04
AP4S1Q9Y587 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.29□□□□□ -2.04
AP4S1Q9Y587 AC061975.8-201ENST00000587058 721 ntBASIC2.29□□□□□ -2.04
AP4S1Q9Y587 AL390240.1-201ENST00000612950 384 ntBASIC2.29□□□□□ -2.04
AP4S1Q9Y587 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
AP4S1Q9Y587 AC016542.2-201ENST00000624201 619 ntBASIC2.29□□□□□ -2.04
AP4S1Q9Y587 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.29□□□□□ -2.04
AP4S1Q9Y587 AC233263.6-201ENST00000631132 1963 ntBASIC2.29□□□□□ -2.04
AP4S1Q9Y587 RNA5SP37-201ENST00000365420 130 ntBASIC2.28□□□□□ -2.04
AP4S1Q9Y587 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
AP4S1Q9Y587 UBA52P6-201ENST00000399822 382 ntBASIC2.28□□□□□ -2.04
AP4S1Q9Y587 AL034374.1-201ENST00000406329 351 ntBASIC2.28□□□□□ -2.04
AP4S1Q9Y587 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
AP4S1Q9Y587 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
AP4S1Q9Y587 AC069157.1-201ENST00000421749 137 ntBASIC2.28□□□□□ -2.04
AP4S1Q9Y587 ATP5F1P1-201ENST00000433775 569 ntBASIC2.28□□□□□ -2.04
AP4S1Q9Y587 DPPA3P1-201ENST00000448050 469 ntBASIC2.28□□□□□ -2.04
AP4S1Q9Y587 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms