Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 Y_RNA.176-201ENST00000363815 109 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 U3.11-201ENST00000364476 212 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 RNU6-601P-201ENST00000384540 107 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 RN7SKP151-201ENST00000410230 316 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 RN7SKP126-201ENST00000411143 300 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 RNU6-603P-201ENST00000411403 107 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 MCFD2P1-201ENST00000417812 300 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 AC099336.2-201ENST00000422457 254 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 AL118520.1-201ENST00000450770 291 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 RPL12P25-201ENST00000455592 494 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 AC099560.2-201ENST00000457554 255 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 AC021382.1-201ENST00000483523 359 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 IGLV2-34-201ENST00000490007 283 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 Y_RNA.654-201ENST00000497848 106 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 GAPDHP62-201ENST00000515313 990 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 RNA5SP454-201ENST00000517231 127 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 AC068993.1-201ENST00000546724 589 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 MIR4703-201ENST00000577728 79 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 MIR5583-1-201ENST00000580941 59 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 AC209154.1-201ENST00000582156 337 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 AF038458.1-201ENST00000588406 262 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 AL669831.4-202ENST00000590817 238 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 CYP4F35P-202ENST00000636121 390 ntBASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
ZC3H4Q9UPT8 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 THAP12P4-201ENST00000528321 2266 ntBASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 SNORA63.7-201ENST00000365579 123 ntBASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 RNU6-398P-201ENST00000384143 109 ntBASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 RNU6-847P-201ENST00000411115 108 ntBASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 AL359265.2-201ENST00000434367 631 ntBASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 AL353597.2-202ENST00000434901 373 ntBASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 MTND1P9-201ENST00000453775 944 ntBASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 AC079168.1-201ENST00000458741 345 ntBASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 RN7SL283P-201ENST00000489055 303 ntBASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 AC020893.1-201ENST00000502452 580 ntBASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 LIAS-206ENST00000513731 826 ntTSL 5 BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 RNU7-51P-201ENST00000516560 62 ntBASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 RNU6-1213P-201ENST00000517075 94 ntBASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 AC245517.5-201ENST00000611529 162 ntBASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 AC012409.4-201ENST00000612923 249 ntBASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 AL390240.1-201ENST00000612950 384 ntBASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 EIF3FP1-201ENST00000613970 806 ntBASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 AP000843.1-201ENST00000624880 701 ntBASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.68□□□□□ -1.34
ZC3H4Q9UPT8 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AC002525.1-201ENST00000624392 1622 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 Y_RNA.364-201ENST00000365532 101 ntBASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
ZC3H4Q9UPT8 AC096644.2-201ENST00000429278 159 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms