Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 RN7SKP145-201ENST00000363291 303 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 RNU5E-8P-201ENST00000363502 116 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 Y_RNA.231-201ENST00000364358 102 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 U3.29-201ENST00000391296 212 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AL109941.1-201ENST00000401925 229 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 RNU2-15P-201ENST00000410692 191 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 CHIAP3-201ENST00000423668 1133 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 DUTP6-201ENST00000425573 462 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AC093655.2-201ENST00000425735 631 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AL138799.3-201ENST00000438968 350 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 MTND3P16-201ENST00000452205 344 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AC002553.2-201ENST00000453217 340 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AC108059.3-201ENST00000456388 214 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 RNU6-329P-201ENST00000459618 107 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 RPS4XP10-201ENST00000465034 731 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AL049714.1-201ENST00000466686 347 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 RPS20P21-201ENST00000466859 343 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 RPL7P19-201ENST00000469948 618 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AC007537.2-201ENST00000472093 511 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AL139099.1-201ENST00000497398 403 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 MTND5P5-201ENST00000503764 376 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 COX7A2P2-201ENST00000505291 250 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AL671862.1-201ENST00000515851 349 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 HMGB1P40-201ENST00000525121 540 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AC011979.2-201ENST00000527568 352 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AP003072.1-201ENST00000531740 145 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 RPL21P12-201ENST00000559810 515 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 MIR3934-201ENST00000579806 107 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 MIR4742-201ENST00000581069 85 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 MIR3936-201ENST00000584304 110 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AC002550.2-201ENST00000621246 394 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 AC008758.3-201ENST00000507003 1829 ntBASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDC42EP3Q9UKI2 NXPH1-205ENST00000602349 1953 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 RNU6-511P-201ENST00000363496 107 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 RNU1-106P-201ENST00000384382 164 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 ENSAP1-201ENST00000392855 326 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 TXNP7-201ENST00000406296 293 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 U3.36-201ENST00000408418 213 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 AC009302.1-201ENST00000417147 390 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 MTCYBP8-201ENST00000422855 651 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 MED13P1-201ENST00000428342 171 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 OR4K11P-201ENST00000431829 904 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 ERLEC1P1-201ENST00000433806 578 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 OR6D1P-201ENST00000436165 939 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 RAC1P7-201ENST00000445367 377 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 MEMO1P4-201ENST00000453590 386 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 AC006512.1-201ENST00000468816 291 ntBASIC4.54□□□□□ -1.68
CDC42EP3Q9UKI2 AC126389.1-201ENST00000477436 290 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms