Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC026634.1-201ENST00000634369 198 ntBASIC3.27□□□□□ -1.89
PHRF1Q9P1Y6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
PHRF1Q9P1Y6 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PHRF1Q9P1Y6 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PHRF1Q9P1Y6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PHRF1Q9P1Y6 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PHRF1Q9P1Y6 GSTA12P-201ENST00000402398 508 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 AL024474.1-201ENST00000404655 591 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 AC007064.1-201ENST00000412238 351 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 AC244505.4-201ENST00000434905 287 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 AC011816.1-201ENST00000441346 546 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 SSXP5-201ENST00000443473 287 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 SEPT7P6-201ENST00000469999 1143 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 RPL9P6-201ENST00000492764 598 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 ACTR6P1-201ENST00000514311 1104 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 PDCD5P1-201ENST00000543528 309 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 CKS1BP1-201ENST00000555221 240 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 LRRC77P-213ENST00000637727 880 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 AL445437.1-201ENST00000623157 3087 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 RPL9P7-201ENST00000330965 580 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 RNA5SP456-201ENST00000364002 114 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 Y_RNA.226-201ENST00000364337 114 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 AC019155.1-201ENST00000382242 574 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 AC012498.1-201ENST00000424037 437 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 AC068587.2-201ENST00000478386 781 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 LINC00888-204ENST00000487386 421 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 AP001207.1-201ENST00000524051 481 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 AC012119.1-201ENST00000603184 222 ntBASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
PHRF1Q9P1Y6 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
PHRF1Q9P1Y6 MTND5P6-201ENST00000422338 1798 ntBASIC3.25□□□□□ -1.89
PHRF1Q9P1Y6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
PHRF1Q9P1Y6 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
PHRF1Q9P1Y6 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.25□□□□□ -1.89
PHRF1Q9P1Y6 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PHRF1Q9P1Y6 AL512430.2-201ENST00000406786 339 ntBASIC3.25□□□□□ -1.89
PHRF1Q9P1Y6 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.25□□□□□ -1.89
PHRF1Q9P1Y6 USP9YP20-201ENST00000419224 558 ntBASIC3.25□□□□□ -1.89
PHRF1Q9P1Y6 SETP10-201ENST00000424368 814 ntBASIC3.25□□□□□ -1.89
PHRF1Q9P1Y6 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.25□□□□□ -1.89
PHRF1Q9P1Y6 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.25□□□□□ -1.89
PHRF1Q9P1Y6 AC025181.1-201ENST00000477507 416 ntBASIC3.25□□□□□ -1.89
PHRF1Q9P1Y6 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
PHRF1Q9P1Y6 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.25□□□□□ -1.89
PHRF1Q9P1Y6 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.25□□□□□ -1.89
PHRF1Q9P1Y6 AC044913.1-201ENST00000557200 430 ntBASIC3.25□□□□□ -1.89
PHRF1Q9P1Y6 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
PHRF1Q9P1Y6 MIR1291-201ENST00000627649 87 ntBASIC3.25□□□□□ -1.89
PHRF1Q9P1Y6 AC110994.2-201ENST00000635481 492 ntBASIC3.25□□□□□ -1.89
PHRF1Q9P1Y6 AL136964.1-201ENST00000622038 2990 ntBASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 RNA5SP210-201ENST00000391034 120 ntBASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 EIF5P1-201ENST00000400019 1231 ntBASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 AL162578.1-201ENST00000406202 378 ntBASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 RNA5SP129-201ENST00000410276 118 ntBASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 RN7SKP140-201ENST00000411196 284 ntBASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 RNU2-6P-201ENST00000411404 190 ntBASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 Z99127.2-201ENST00000441426 334 ntBASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 RPL23AP44-201ENST00000482216 473 ntBASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 SNORA70.14-201ENST00000516205 110 ntBASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 AP001317.1-201ENST00000531194 960 ntBASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 OR7K1P-201ENST00000546439 926 ntBASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 CBX3P5-201ENST00000552017 521 ntBASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 AC107871.2-201ENST00000612894 502 ntBASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 ZNF355P-201ENST00000427301 3216 ntBASIC3.24□□□□□ -1.89
PHRF1Q9P1Y6 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.23□□□□□ -1.89
PHRF1Q9P1Y6 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PHRF1Q9P1Y6 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
PHRF1Q9P1Y6 AC009969.1-201ENST00000438726 172 ntBASIC3.23□□□□□ -1.89
PHRF1Q9P1Y6 VN1R48P-201ENST00000448149 1036 ntBASIC3.23□□□□□ -1.89
PHRF1Q9P1Y6 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.23□□□□□ -1.89
PHRF1Q9P1Y6 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.23□□□□□ -1.89
PHRF1Q9P1Y6 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.23□□□□□ -1.89
PHRF1Q9P1Y6 RNA5SP76-201ENST00000516277 87 ntBASIC3.23□□□□□ -1.89
PHRF1Q9P1Y6 CKS1BP7-201ENST00000522230 235 ntBASIC3.23□□□□□ -1.89
PHRF1Q9P1Y6 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.23□□□□□ -1.89
PHRF1Q9P1Y6 AC123904.3-201ENST00000547218 814 ntBASIC3.23□□□□□ -1.89
PHRF1Q9P1Y6 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.23□□□□□ -1.89
PHRF1Q9P1Y6 NRBF2P1-201ENST00000587407 859 ntBASIC3.23□□□□□ -1.89
PHRF1Q9P1Y6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
PHRF1Q9P1Y6 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms