Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 VN1R17P-201ENST00000472048 1090 ntBASIC2.84□□□□□ -1.95
CISHQ9NSE2 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.84□□□□□ -1.95
CISHQ9NSE2 GMPSP1-201ENST00000514075 579 ntBASIC2.84□□□□□ -1.95
CISHQ9NSE2 AP003102.1-201ENST00000525638 661 ntBASIC2.84□□□□□ -1.95
CISHQ9NSE2 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.84□□□□□ -1.95
CISHQ9NSE2 OR6C73P-201ENST00000546432 358 ntBASIC2.84□□□□□ -1.95
CISHQ9NSE2 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.84□□□□□ -1.95
CISHQ9NSE2 AC084035.1-201ENST00000634543 607 ntBASIC2.84□□□□□ -1.95
CISHQ9NSE2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
CISHQ9NSE2 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.84□□□□□ -1.96
CISHQ9NSE2 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.84□□□□□ -1.96
CISHQ9NSE2 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.96
CISHQ9NSE2 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.84□□□□□ -1.96
CISHQ9NSE2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.83□□□□□ -1.96
CISHQ9NSE2 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CISHQ9NSE2 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
CISHQ9NSE2 RPL26P37-201ENST00000411983 438 ntBASIC2.83□□□□□ -1.96
CISHQ9NSE2 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.83□□□□□ -1.96
CISHQ9NSE2 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC2.83□□□□□ -1.96
CISHQ9NSE2 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.83□□□□□ -1.96
CISHQ9NSE2 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC2.83□□□□□ -1.96
CISHQ9NSE2 AL513175.1-201ENST00000431492 780 ntBASIC2.83□□□□□ -1.96
CISHQ9NSE2 CKS1BP5-201ENST00000434172 273 ntBASIC2.83□□□□□ -1.96
CISHQ9NSE2 RPL21P112-201ENST00000434403 463 ntBASIC2.83□□□□□ -1.96
CISHQ9NSE2 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.83□□□□□ -1.96
CISHQ9NSE2 ARPC3P2-201ENST00000457786 533 ntBASIC2.83□□□□□ -1.96
CISHQ9NSE2 RN7SL297P-201ENST00000483161 293 ntBASIC2.83□□□□□ -1.96
CISHQ9NSE2 RPL23AP55-201ENST00000498163 452 ntBASIC2.83□□□□□ -1.96
CISHQ9NSE2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.83□□□□□ -1.96
CISHQ9NSE2 RNA5SP356-201ENST00000515972 94 ntBASIC2.83□□□□□ -1.96
CISHQ9NSE2 RNU6-1004P-201ENST00000516584 111 ntBASIC2.83□□□□□ -1.96
CISHQ9NSE2 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC2.83□□□□□ -1.96
CISHQ9NSE2 PCNAP1-202ENST00000595299 752 ntBASIC2.83□□□□□ -1.96
CISHQ9NSE2 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.83□□□□□ -1.96
CISHQ9NSE2 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.83□□□□□ -1.96
CISHQ9NSE2 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.83□□□□□ -1.96
CISHQ9NSE2 MTND4P34-201ENST00000572715 1371 ntBASIC2.83□□□□□ -1.96
CISHQ9NSE2 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CISHQ9NSE2 MTCO1P8-201ENST00000416914 1523 ntBASIC2.83□□□□□ -1.96
CISHQ9NSE2 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
CISHQ9NSE2 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
CISHQ9NSE2 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
CISHQ9NSE2 RNA5SP391-201ENST00000363456 119 ntBASIC2.82□□□□□ -1.96
CISHQ9NSE2 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
CISHQ9NSE2 U3.26-201ENST00000391236 204 ntBASIC2.82□□□□□ -1.96
CISHQ9NSE2 AL122016.1-201ENST00000403365 367 ntBASIC2.82□□□□□ -1.96
CISHQ9NSE2 AL590290.1-201ENST00000405336 380 ntBASIC2.82□□□□□ -1.96
CISHQ9NSE2 RNU2-52P-201ENST00000410680 190 ntBASIC2.82□□□□□ -1.96
CISHQ9NSE2 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.82□□□□□ -1.96
CISHQ9NSE2 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC2.82□□□□□ -1.96
CISHQ9NSE2 AL606490.7-201ENST00000433136 191 ntBASIC2.82□□□□□ -1.96
CISHQ9NSE2 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.82□□□□□ -1.96
CISHQ9NSE2 RPL23AP33-201ENST00000442301 452 ntBASIC2.82□□□□□ -1.96
CISHQ9NSE2 HMGB1P26-201ENST00000452520 628 ntBASIC2.82□□□□□ -1.96
CISHQ9NSE2 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.82□□□□□ -1.96
CISHQ9NSE2 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CISHQ9NSE2 POU5F1P7-201ENST00000508759 541 ntBASIC2.82□□□□□ -1.96
CISHQ9NSE2 SETP12-201ENST00000514068 805 ntBASIC2.82□□□□□ -1.96
CISHQ9NSE2 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.82□□□□□ -1.96
CISHQ9NSE2 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.82□□□□□ -1.96
CISHQ9NSE2 OR4A45P-201ENST00000529954 901 ntBASIC2.82□□□□□ -1.96
CISHQ9NSE2 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.82□□□□□ -1.96
CISHQ9NSE2 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.82□□□□□ -1.96
CISHQ9NSE2 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.82□□□□□ -1.96
CISHQ9NSE2 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.82□□□□□ -1.96
CISHQ9NSE2 AP004372.1-201ENST00000604842 844 ntBASIC2.82□□□□□ -1.96
CISHQ9NSE2 AL392112.1-201ENST00000605115 829 ntBASIC2.82□□□□□ -1.96
CISHQ9NSE2 AC090525.3-201ENST00000605601 189 ntBASIC2.82□□□□□ -1.96
CISHQ9NSE2 AL079305.1-201ENST00000623159 3008 ntBASIC2.82□□□□□ -1.96
CISHQ9NSE2 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
CISHQ9NSE2 AL365361.1-201ENST00000566942 3481 ntBASIC2.82□□□□□ -1.96
CISHQ9NSE2 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
CISHQ9NSE2 RNU6-859P-201ENST00000362728 107 ntBASIC2.81□□□□□ -1.96
CISHQ9NSE2 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
CISHQ9NSE2 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
CISHQ9NSE2 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.81□□□□□ -1.96
CISHQ9NSE2 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.81□□□□□ -1.96
CISHQ9NSE2 RPL7P46-201ENST00000425129 740 ntBASIC2.81□□□□□ -1.96
CISHQ9NSE2 OR6C71P-201ENST00000432580 913 ntBASIC2.81□□□□□ -1.96
CISHQ9NSE2 HIGD1AP11-201ENST00000438361 280 ntBASIC2.81□□□□□ -1.96
CISHQ9NSE2 MED6P1-201ENST00000439659 713 ntBASIC2.81□□□□□ -1.96
CISHQ9NSE2 AP000936.2-201ENST00000447151 681 ntBASIC2.81□□□□□ -1.96
CISHQ9NSE2 GAPDHP27-201ENST00000447427 1020 ntBASIC2.81□□□□□ -1.96
CISHQ9NSE2 RPL36AP33-201ENST00000450395 310 ntBASIC2.81□□□□□ -1.96
CISHQ9NSE2 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.81□□□□□ -1.96
CISHQ9NSE2 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.81□□□□□ -1.96
CISHQ9NSE2 AP001486.1-201ENST00000463339 476 ntBASIC2.81□□□□□ -1.96
CISHQ9NSE2 HMGB1P25-201ENST00000468402 607 ntBASIC2.81□□□□□ -1.96
CISHQ9NSE2 AP000926.3-201ENST00000497201 299 ntBASIC2.81□□□□□ -1.96
CISHQ9NSE2 RNA5SP76-201ENST00000516277 87 ntBASIC2.81□□□□□ -1.96
CISHQ9NSE2 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC2.81□□□□□ -1.96
CISHQ9NSE2 AC100870.1-201ENST00000522035 505 ntBASIC2.81□□□□□ -1.96
CISHQ9NSE2 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC2.81□□□□□ -1.96
CISHQ9NSE2 AL163153.1-201ENST00000554223 283 ntBASIC2.81□□□□□ -1.96
CISHQ9NSE2 OR4T1P-201ENST00000554933 911 ntBASIC2.81□□□□□ -1.96
CISHQ9NSE2 MIR4319-201ENST00000577285 85 ntBASIC2.81□□□□□ -1.96
CISHQ9NSE2 MIR4474-201ENST00000579189 78 ntBASIC2.81□□□□□ -1.96
CISHQ9NSE2 AL035413.2-201ENST00000604801 525 ntBASIC2.81□□□□□ -1.96
CISHQ9NSE2 AC069234.5-201ENST00000611056 416 ntBASIC2.81□□□□□ -1.96
CISHQ9NSE2 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms