Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 MTND5P1-201ENST00000445440 1375 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 AC107982.1-201ENST00000507171 1300 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 AC016716.1-201ENST00000265882 708 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 RNU4-35P-201ENST00000362588 141 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 RNU1-33P-201ENST00000364249 162 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 Y_RNA.311-201ENST00000365068 96 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 RHOT1P2-201ENST00000366423 333 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 SNORD116-8-201ENST00000384365 95 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 FCF1P2-201ENST00000415284 583 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 HMGB3P20-201ENST00000417997 600 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 BOLA3P4-201ENST00000418151 400 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 MTND2P18-201ENST00000419962 1030 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 MTND4P20-201ENST00000424125 869 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 AC010881.1-201ENST00000433830 235 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 B3GNT2P1-201ENST00000434960 952 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 MTCYBP34-201ENST00000439552 670 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 ART2BP-201ENST00000453501 499 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 BX510359.1-201ENST00000456973 237 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 SNORD108-201ENST00000459332 71 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 AC104090.1-201ENST00000506341 1171 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 MRPS33P3-201ENST00000513456 322 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 SNORA70.24-201ENST00000517233 118 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 LLPHP1-201ENST00000603571 367 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 U4.6-201ENST00000621618 127 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 CU459211.1-201ENST00000635667 749 ntBASIC4.28□□□□□ -1.72
DDX4Q9NQI0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
DDX4Q9NQI0 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
DDX4Q9NQI0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
DDX4Q9NQI0 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.27□□□□□ -1.73
DDX4Q9NQI0 CDR1-202ENST00000625883 1485 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 XIAPP3-201ENST00000312918 795 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 RNA5SP50-201ENST00000363731 107 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
DDX4Q9NQI0 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC4.27□□□□□ -1.73
DDX4Q9NQI0 AC004022.2-201ENST00000413824 193 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 RPL31P45-201ENST00000419532 356 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 SDCBPP2-201ENST00000424643 885 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.27□□□□□ -1.73
DDX4Q9NQI0 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.27□□□□□ -1.73
DDX4Q9NQI0 AL109741.2-201ENST00000455561 343 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.27□□□□□ -1.73
DDX4Q9NQI0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.27□□□□□ -1.73
DDX4Q9NQI0 DSTNP2-201ENST00000504533 515 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 AC026784.1-201ENST00000507986 352 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 MTND1P22-201ENST00000510572 951 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 VWA8P1-201ENST00000510889 176 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.27□□□□□ -1.73
DDX4Q9NQI0 RN7SKP31-201ENST00000516354 278 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 RNU6-1261P-201ENST00000517194 104 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.27□□□□□ -1.73
DDX4Q9NQI0 CBX3P5-201ENST00000552017 521 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 TRAV15-201ENST00000556680 249 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 AC074051.3-201ENST00000570238 358 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 AC008088.1-201ENST00000580993 280 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 AC018638.7-201ENST00000605836 1114 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 AC131235.4-201ENST00000609288 620 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 VIS1.1-201ENST00000610517 203 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 AL355365.1-201ENST00000616480 294 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
DDX4Q9NQI0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.27□□□□□ -1.73
DDX4Q9NQI0 AC007656.2-201ENST00000624902 4547 ntBASIC4.27□□□□□ -1.73
DDX4Q9NQI0 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.27□□□□□ -1.73
DDX4Q9NQI0 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
DDX4Q9NQI0 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
DDX4Q9NQI0 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
DDX4Q9NQI0 OR5H2-201ENST00000355273 945 ntBASIC4.26□□□□□ -1.73
DDX4Q9NQI0 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms