Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC092634.6-201ENST00000418558 192 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AC233981.1-201ENST00000423224 461 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AL390023.1-201ENST00000428836 262 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 UBE2V1P1-201ENST00000430836 445 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 ATP5JP1-201ENST00000431631 322 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AC005345.1-201ENST00000431868 217 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AC010881.1-201ENST00000433830 235 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 RSL24D1P3-201ENST00000449255 495 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 RAB9AP1-201ENST00000449393 573 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AC004801.2-202ENST00000463559 283 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AC023598.1-201ENST00000472521 361 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 ACTR3P3-201ENST00000480448 893 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 RN7SL809P-201ENST00000482040 297 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AC068587.1-201ENST00000483613 781 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AC020893.1-201ENST00000502452 580 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AC110768.1-201ENST00000509222 400 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 RPL7L1P13-201ENST00000511702 739 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 RN7SKP13-201ENST00000515933 244 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 RNU1-95P-201ENST00000516357 160 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 RNU1-128P-201ENST00000516704 160 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AL139174.1-201ENST00000531489 886 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 UBE2NP1-201ENST00000545592 458 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AC011602.1-201ENST00000546484 331 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 SERPINE4P-201ENST00000554978 281 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AC138915.2-201ENST00000569776 97 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AC110760.3-201ENST00000598794 467 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AC103881.1-201ENST00000603476 538 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AC072039.2-201ENST00000608883 439 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AP003072.4-201ENST00000624580 310 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AC026634.1-201ENST00000634369 198 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AL356489.2-201ENST00000566968 3528 ntBASIC3.75□□□□□ -1.81
SIX2Q9NPC8 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.75□□□□□ -1.81
SIX2Q9NPC8 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AL513185.3-201ENST00000433335 1300 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AC107982.1-201ENST00000507171 1300 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 NMD3P1-201ENST00000439704 1488 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AL356274.2-201ENST00000624379 3752 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 SNORA5A-201ENST00000384111 134 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 MIR1302-8-201ENST00000408342 128 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AC068533.2-201ENST00000411872 306 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AL031736.2-201ENST00000426573 787 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 NDUFA5P7-201ENST00000452914 242 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AC073387.1-201ENST00000453261 709 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AC111000.2-201ENST00000507775 550 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AC104619.4-201ENST00000510773 249 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 RNU6-488P-201ENST00000515918 99 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 RN7SKP96-201ENST00000516948 297 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 RNU6-232P-201ENST00000517144 64 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AC092851.1-201ENST00000535964 478 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AC018552.3-201ENST00000567416 561 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 ISCA1P3-201ENST00000577104 373 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AC090616.2-202ENST00000584248 222 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 VN1R90P-201ENST00000595717 726 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 AC010591.1-201ENST00000603941 649 ntBASIC3.74□□□□□ -1.81
SIX2Q9NPC8 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms