Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 UQCRBP1-201ENST00000421129 336 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 BX510359.3-201ENST00000422168 306 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AL590103.1-201ENST00000434488 307 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 MTCYBP39-201ENST00000437562 491 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 PAXBP1P1-201ENST00000449315 447 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 snoU13.24-201ENST00000458998 104 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AC091564.1-201ENST00000464563 479 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 RPL21P126-201ENST00000470049 478 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 RPL30P6-201ENST00000475925 342 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AC104563.1-201ENST00000476147 376 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 RPS3AP43-201ENST00000479743 781 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 BET1P1-201ENST00000482276 359 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AC093267.1-201ENST00000489176 961 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AP001086.1-201ENST00000494882 321 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 TXNP6-201ENST00000510190 310 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AC005921.1-201ENST00000510589 286 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AC084824.1-201ENST00000550917 1005 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AC023161.2-201ENST00000551218 780 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AC012435.1-202ENST00000568772 240 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 MIR4436B2-201ENST00000581415 91 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 MIR4436B1-201ENST00000583272 91 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AC107214.2-201ENST00000608204 634 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AL392048.1-201ENST00000613946 534 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AL021997.2-201ENST00000615674 271 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AC068057.2-201ENST00000624047 895 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 AL021368.2-201ENST00000606125 5352 ntBASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CHMP1AQ9HD42 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 MFSD8-216ENST00000641147 4009 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AL161781.1-201ENST00000354277 403 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 RNA5SP322-201ENST00000363617 119 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 SNORA7.2-201ENST00000364446 145 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 RNU1-89P-201ENST00000384592 164 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 Y_RNA.560-201ENST00000384689 102 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AC097374.1-203ENST00000400783 485 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 RPL7AP25-201ENST00000423357 805 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 BX119904.4-201ENST00000424402 301 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AP000542.1-201ENST00000448473 371 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 RPS24P6-201ENST00000452670 400 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AL136097.1-201ENST00000456945 913 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AC010326.1-201ENST00000462726 602 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AC092324.1-201ENST00000468671 324 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AC010285.1-201ENST00000470580 392 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 ST13P14-201ENST00000474095 734 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 RPF2P2-201ENST00000504693 896 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AC108064.1-201ENST00000513791 460 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AC017037.2-201ENST00000513850 890 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 MED28P5-201ENST00000528254 438 ntBASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 VBP1-203ENST00000535916 944 ntTSL 2 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC3.62□□□□□ -1.83
CHMP1AQ9HD42 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms