Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC103710.3-201ENST00000608157 948 ntBASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AC104763.3-201ENST00000613765 618 ntBASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AC105227.2-201ENST00000615075 605 ntBASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AC243756.2-201ENST00000618406 463 ntBASIC3.67□□□□□ -1.82
RNF41Q9H4P4 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AC139713.2-210ENST00000641741 992 ntBASIC3.67□□□□□ -1.82
RNF41Q9H4P4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF41Q9H4P4 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.67□□□□□ -1.82
RNF41Q9H4P4 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RNF41Q9H4P4 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
RNF41Q9H4P4 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 MTND5P24-201ENST00000438892 1767 ntBASIC3.66□□□□□ -1.82
RNF41Q9H4P4 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 RIOK3P1-201ENST00000418778 1528 ntBASIC3.66□□□□□ -1.82
RNF41Q9H4P4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 RNU6-236P-201ENST00000363886 106 ntBASIC3.66□□□□□ -1.82
RNF41Q9H4P4 TAF13P2-201ENST00000416876 286 ntBASIC3.66□□□□□ -1.82
RNF41Q9H4P4 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 RPL23AP69-201ENST00000431134 458 ntBASIC3.66□□□□□ -1.82
RNF41Q9H4P4 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 AC002542.1-201ENST00000440683 193 ntBASIC3.66□□□□□ -1.82
RNF41Q9H4P4 RPS12P18-201ENST00000442381 270 ntBASIC3.66□□□□□ -1.82
RNF41Q9H4P4 RAB11AP1-201ENST00000442978 646 ntBASIC3.66□□□□□ -1.82
RNF41Q9H4P4 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 AC119751.1-201ENST00000513357 765 ntBASIC3.66□□□□□ -1.82
RNF41Q9H4P4 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 AL442163.2-201ENST00000553912 710 ntBASIC3.66□□□□□ -1.82
RNF41Q9H4P4 ZNF971P-201ENST00000562068 1249 ntBASIC3.66□□□□□ -1.82
RNF41Q9H4P4 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 VN1R87P-201ENST00000596706 487 ntBASIC3.66□□□□□ -1.82
RNF41Q9H4P4 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 AC009948.4-201ENST00000604692 675 ntBASIC3.66□□□□□ -1.82
RNF41Q9H4P4 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 VN1R7P-201ENST00000619242 903 ntBASIC3.66□□□□□ -1.82
RNF41Q9H4P4 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RNF41Q9H4P4 AL139811.1-201ENST00000424779 2299 ntBASIC3.65□□□□□ -1.82
RNF41Q9H4P4 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RNF41Q9H4P4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RNF41Q9H4P4 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.65□□□□□ -1.82
RNF41Q9H4P4 MTND4P8-201ENST00000514997 1362 ntBASIC3.65□□□□□ -1.82
RNF41Q9H4P4 MTCO1P14-201ENST00000441695 1559 ntBASIC3.65□□□□□ -1.82
RNF41Q9H4P4 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RNF41Q9H4P4 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
RNF41Q9H4P4 MIR525-201ENST00000384978 85 ntBASIC3.65□□□□□ -1.83
RNF41Q9H4P4 HNRNPDP2-201ENST00000406475 478 ntBASIC3.65□□□□□ -1.83
RNF41Q9H4P4 SNORA11.1-201ENST00000408133 129 ntBASIC3.65□□□□□ -1.83
RNF41Q9H4P4 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF41Q9H4P4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.65□□□□□ -1.83
RNF41Q9H4P4 PAICSP7-201ENST00000419829 962 ntBASIC3.65□□□□□ -1.83
RNF41Q9H4P4 USP9YP7-201ENST00000436723 430 ntBASIC3.65□□□□□ -1.83
RNF41Q9H4P4 USP9YP32-201ENST00000452432 430 ntBASIC3.65□□□□□ -1.83
RNF41Q9H4P4 HMGN2P7-201ENST00000456186 273 ntBASIC3.65□□□□□ -1.83
RNF41Q9H4P4 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.65□□□□□ -1.83
RNF41Q9H4P4 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.65□□□□□ -1.83
RNF41Q9H4P4 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF41Q9H4P4 AC091860.1-201ENST00000505723 432 ntBASIC3.65□□□□□ -1.83
RNF41Q9H4P4 AC026427.2-201ENST00000506228 536 ntBASIC3.65□□□□□ -1.83
RNF41Q9H4P4 PTGES3P3-201ENST00000511479 482 ntBASIC3.65□□□□□ -1.83
RNF41Q9H4P4 PSMA2P1-201ENST00000526365 646 ntBASIC3.65□□□□□ -1.83
RNF41Q9H4P4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.65□□□□□ -1.83
RNF41Q9H4P4 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RNF41Q9H4P4 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF41Q9H4P4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.65□□□□□ -1.83
RNF41Q9H4P4 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF41Q9H4P4 AC091057.3-201ENST00000602684 733 ntBASIC3.65□□□□□ -1.83
RNF41Q9H4P4 RPAP2P1-201ENST00000603626 1168 ntBASIC3.65□□□□□ -1.83
RNF41Q9H4P4 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF41Q9H4P4 AC093673.2-201ENST00000609674 331 ntBASIC3.65□□□□□ -1.83
RNF41Q9H4P4 AC012531.5-201ENST00000611375 151 ntBASIC3.65□□□□□ -1.83
RNF41Q9H4P4 AC084824.4-201ENST00000620106 731 ntBASIC3.65□□□□□ -1.83
RNF41Q9H4P4 AL445984.1-201ENST00000637834 659 ntBASIC3.65□□□□□ -1.83
RNF41Q9H4P4 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.83
RNF41Q9H4P4 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RNF41Q9H4P4 AP001486.2-201ENST00000561652 5113 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 ELL2P4-201ENST00000446870 1376 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 AL136964.1-201ENST00000622038 2990 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 RNA5SP391-201ENST00000363456 119 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 RNU6-805P-201ENST00000365643 106 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 SNORA9-201ENST00000384215 133 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 MIR491-201ENST00000384877 84 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 RNU6-575P-201ENST00000411326 105 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.64□□□□□ -1.83
RNF41Q9H4P4 GTF2IP23-201ENST00000423746 351 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.64□□□□□ -1.83
RNF41Q9H4P4 B3GNT2P1-201ENST00000434960 952 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC3.64□□□□□ -1.83
RNF41Q9H4P4 AC004865.1-201ENST00000442276 1003 ntBASIC3.64□□□□□ -1.83
RNF41Q9H4P4 HMGB3P6-201ENST00000444896 598 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms