Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 MAGOH2P-202ENST00000584384 429 ntBASIC3.56□□□□□ -1.84
UBQLN3Q9H347 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.56□□□□□ -1.84
UBQLN3Q9H347 BNIP3P24-201ENST00000593398 557 ntBASIC3.56□□□□□ -1.84
UBQLN3Q9H347 AC103881.1-201ENST00000603476 538 ntBASIC3.56□□□□□ -1.84
UBQLN3Q9H347 AC069304.2-201ENST00000605154 435 ntBASIC3.56□□□□□ -1.84
UBQLN3Q9H347 AL590282.1-201ENST00000610379 1136 ntBASIC3.56□□□□□ -1.84
UBQLN3Q9H347 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.56□□□□□ -1.84
UBQLN3Q9H347 AC243773.3-201ENST00000613270 256 ntBASIC3.56□□□□□ -1.84
UBQLN3Q9H347 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.56□□□□□ -1.84
UBQLN3Q9H347 AL161637.1-201ENST00000622380 412 ntBASIC3.56□□□□□ -1.84
UBQLN3Q9H347 FP236240.3-201ENST00000623061 327 ntBASIC3.56□□□□□ -1.84
UBQLN3Q9H347 AC040168.1-201ENST00000623594 991 ntBASIC3.56□□□□□ -1.84
UBQLN3Q9H347 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.56□□□□□ -1.84
UBQLN3Q9H347 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.56□□□□□ -1.84
UBQLN3Q9H347 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.56□□□□□ -1.84
UBQLN3Q9H347 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.56□□□□□ -1.84
UBQLN3Q9H347 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 ZNF876P-202ENST00000398732 1485 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 RNU1-18P-201ENST00000363062 164 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 Y_RNA.311-201ENST00000365068 96 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 RNA5SP235-201ENST00000365411 114 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 SNORD6-201ENST00000365444 73 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 CYCSP19-201ENST00000411715 316 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 MTCO3P12-201ENST00000416718 547 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 ELOCP9-201ENST00000418624 239 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 TIMM9P2-201ENST00000419324 266 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AL139421.1-201ENST00000423010 169 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AC006548.1-201ENST00000427470 102 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 MRPS18BP2-201ENST00000434310 759 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 HMGB1P12-201ENST00000438594 598 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 MTND2P20-201ENST00000440805 661 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 OFD1P3Y-201ENST00000453312 783 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 RPL21P11-201ENST00000461458 483 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AC010285.1-201ENST00000470580 392 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 RN7SL323P-201ENST00000494712 295 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 NIPA2P2-201ENST00000496376 1083 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AL139099.1-201ENST00000497398 403 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 RNU6-583P-201ENST00000516012 92 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 NBEAP1-201ENST00000554452 979 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AL512347.1-201ENST00000566420 503 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 MIR4637-201ENST00000582405 84 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AC015726.1-201ENST00000602353 681 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 BNIP3P11-201ENST00000603878 563 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AC009220.3-201ENST00000604318 586 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AL034351.1-201ENST00000605288 668 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AC097478.2-201ENST00000610572 514 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AL139089.1-201ENST00000620372 975 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AC073530.2-201ENST00000623987 261 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 CR381572.1-201ENST00000625098 102 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
UBQLN3Q9H347 AP001486.2-201ENST00000561652 5113 ntBASIC3.55□□□□□ -1.84
UBQLN3Q9H347 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 MAPK10-372ENST00000641954 3413 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 AP002907.1-201ENST00000606361 1430 ntBASIC3.54□□□□□ -1.84
UBQLN3Q9H347 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.54□□□□□ -1.84
UBQLN3Q9H347 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms