Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL451074.5-201ENST00000415894 435 ntBASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 ZYG11AP1-201ENST00000430329 837 ntBASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 AC093156.1-201ENST00000440382 670 ntBASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 AC147055.1-201ENST00000509261 750 ntBASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 RNU6-237P-201ENST00000515985 71 ntBASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 AL163153.1-201ENST00000554223 283 ntBASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 PCNAP1-202ENST00000595299 752 ntBASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 AL020991.1-201ENST00000612314 373 ntBASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 AC110774.1-201ENST00000623567 2018 ntBASIC3.48□□□□□ -1.85
UPF3BQ9BZI7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
UPF3BQ9BZI7 MIR607-201ENST00000385241 96 ntBASIC3.47□□□□□ -1.85
UPF3BQ9BZI7 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.47□□□□□ -1.85
UPF3BQ9BZI7 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.47□□□□□ -1.85
UPF3BQ9BZI7 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.47□□□□□ -1.85
UPF3BQ9BZI7 AC092754.2-201ENST00000463506 460 ntBASIC3.47□□□□□ -1.85
UPF3BQ9BZI7 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
UPF3BQ9BZI7 AC010198.2-201ENST00000550612 259 ntBASIC3.47□□□□□ -1.85
UPF3BQ9BZI7 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.47□□□□□ -1.85
UPF3BQ9BZI7 RPL23AP92-201ENST00000603609 255 ntBASIC3.47□□□□□ -1.85
UPF3BQ9BZI7 AC069304.3-201ENST00000603938 1084 ntBASIC3.47□□□□□ -1.85
UPF3BQ9BZI7 AC113194.1-201ENST00000606037 500 ntBASIC3.47□□□□□ -1.85
UPF3BQ9BZI7 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.47□□□□□ -1.85
UPF3BQ9BZI7 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
UPF3BQ9BZI7 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.85
UPF3BQ9BZI7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.46□□□□□ -1.85
UPF3BQ9BZI7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.85
UPF3BQ9BZI7 FAM35BP-202ENST00000497389 3337 ntBASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 MTCO1P8-201ENST00000416914 1523 ntBASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 MIR1261-201ENST00000408659 82 ntBASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 Z99127.2-201ENST00000441426 334 ntBASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 AC108860.1-201ENST00000484521 383 ntBASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 RNA5SP356-201ENST00000515972 94 ntBASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 IGHVII-62-1-201ENST00000519283 235 ntBASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 AP002812.4-201ENST00000532139 286 ntBASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 AL451074.6-201ENST00000608512 729 ntBASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 AC068722.2-201ENST00000618734 544 ntBASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 AC022509.4-201ENST00000621404 572 ntBASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 MIR4496-201ENST00000635896 61 ntBASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.46□□□□□ -1.86
UPF3BQ9BZI7 AL355578.1-201ENST00000607405 1328 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 AC009487.2-201ENST00000420969 6821 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 RNU1-35P-201ENST00000362782 153 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 SNORA7.2-201ENST00000364446 145 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 SNORA71.1-201ENST00000364523 117 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 EIF5P1-201ENST00000400019 1231 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 XKRYP4-201ENST00000414395 483 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 AL513175.1-201ENST00000431492 780 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 AL627224.1-201ENST00000448334 444 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 XKRYP5-201ENST00000449659 483 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 NPM1P13-201ENST00000452663 865 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 AC096992.1-201ENST00000459808 709 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 RPS26P21-201ENST00000475397 348 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 AC005351.1-201ENST00000511152 786 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 AC005951.1-201ENST00000576706 485 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 ELOCP29-201ENST00000588193 334 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 AC012119.1-201ENST00000603184 222 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms