Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 AL391987.6-201ENST00000305671 199 ntBASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 SNORD62.1-201ENST00000362541 86 ntBASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 RNU6-179P-201ENST00000363350 107 ntBASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 RNA5SP387-201ENST00000364226 106 ntBASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 Y_RNA.526-201ENST00000384572 110 ntBASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 RNU6-95P-201ENST00000384697 107 ntBASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 CYP4F32P-201ENST00000426492 504 ntBASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 AC104164.1-201ENST00000460282 590 ntBASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 AL049830.2-201ENST00000480072 201 ntBASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 SNORA31.6-201ENST00000516241 130 ntBASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 RPA2P3-201ENST00000533268 770 ntBASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 AC012616.1-201ENST00000600294 197 ntBASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 AL159153.1-201ENST00000619688 317 ntBASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 AC007529.1-201ENST00000418574 2178 ntBASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 AC026523.2-201ENST00000625039 7739 ntBASIC5.86□□□□□ -1.47
COL25A1Q9BXS0 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 Y_RNA.54-201ENST00000362766 105 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 Y_RNA.84-201ENST00000363011 104 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 RNU6-1059P-201ENST00000363752 98 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 RNU4-50P-201ENST00000364361 141 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 Y_RNA.277-201ENST00000364754 102 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 MIR320B1-201ENST00000390209 79 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 HMGB3P7-201ENST00000400214 611 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 RNU6-121P-201ENST00000410525 99 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 RN7SKP235-201ENST00000410662 305 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 RNU4-46P-201ENST00000410818 138 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 COX6CP10-201ENST00000416832 224 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 RPL7P46-201ENST00000425129 740 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 MRPS18BP2-201ENST00000434310 759 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AL035551.1-201ENST00000446931 348 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AC116533.1-201ENST00000459748 321 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AC055733.3-201ENST00000505214 523 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AC020593.1-201ENST00000507399 299 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 SETP2-201ENST00000553886 926 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AC106785.1-201ENST00000565935 262 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AC027229.1-201ENST00000583887 253 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AC011447.4-201ENST00000587562 111 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AC093227.2-201ENST00000589357 285 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AL118522.2-201ENST00000616045 615 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AL450472.1-202ENST00000637286 180 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AC005183.1-201ENST00000603687 1979 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 ZNF285B-201ENST00000561698 1767 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AL034546.1-201ENST00000623740 3693 ntBASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
COL25A1Q9BXS0 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.84□□□□□ -1.47
COL25A1Q9BXS0 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
COL25A1Q9BXS0 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL25A1Q9BXS0 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
COL25A1Q9BXS0 CASC19-284ENST00000642142 1868 ntBASIC5.84□□□□□ -1.47
COL25A1Q9BXS0 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
COL25A1Q9BXS0 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC5.84□□□□□ -1.47
COL25A1Q9BXS0 RNU4-7P-201ENST00000364758 141 ntBASIC5.84□□□□□ -1.47
COL25A1Q9BXS0 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms