Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 ATP5HP2-201ENST00000433885 485 ntBASIC4.82□□□□□ -1.64
SALL3Q9BXA9 AL353597.2-202ENST00000434901 373 ntBASIC4.82□□□□□ -1.64
SALL3Q9BXA9 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.82□□□□□ -1.64
SALL3Q9BXA9 AC092013.1-201ENST00000438795 332 ntBASIC4.82□□□□□ -1.64
SALL3Q9BXA9 MTND6P18-201ENST00000439477 513 ntBASIC4.82□□□□□ -1.64
SALL3Q9BXA9 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.82□□□□□ -1.64
SALL3Q9BXA9 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.82□□□□□ -1.64
SALL3Q9BXA9 RPL23AP35-201ENST00000451906 501 ntBASIC4.82□□□□□ -1.64
SALL3Q9BXA9 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.82□□□□□ -1.64
SALL3Q9BXA9 BX248409.1-201ENST00000455497 255 ntBASIC4.82□□□□□ -1.64
SALL3Q9BXA9 OR9M1P-201ENST00000459641 921 ntBASIC4.82□□□□□ -1.64
SALL3Q9BXA9 TMED11P-201ENST00000479478 690 ntBASIC4.82□□□□□ -1.64
SALL3Q9BXA9 AC111193.1-201ENST00000504097 155 ntBASIC4.82□□□□□ -1.64
SALL3Q9BXA9 RNU6-506P-201ENST00000516553 94 ntBASIC4.82□□□□□ -1.64
SALL3Q9BXA9 RNA5SP179-201ENST00000517284 121 ntBASIC4.82□□□□□ -1.64
SALL3Q9BXA9 AC025881.1-201ENST00000518851 512 ntBASIC4.82□□□□□ -1.64
SALL3Q9BXA9 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.82□□□□□ -1.64
SALL3Q9BXA9 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.82□□□□□ -1.64
SALL3Q9BXA9 ADI1P3-201ENST00000549509 470 ntBASIC4.82□□□□□ -1.64
SALL3Q9BXA9 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.82□□□□□ -1.64
SALL3Q9BXA9 AC074029.1-201ENST00000552531 1044 ntBASIC4.82□□□□□ -1.64
SALL3Q9BXA9 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.82□□□□□ -1.64
SALL3Q9BXA9 AC009063.1-201ENST00000563342 702 ntBASIC4.82□□□□□ -1.64
SALL3Q9BXA9 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.82□□□□□ -1.64
SALL3Q9BXA9 AC090312.1-201ENST00000580637 348 ntBASIC4.82□□□□□ -1.64
SALL3Q9BXA9 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.82□□□□□ -1.64
SALL3Q9BXA9 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.82□□□□□ -1.64
SALL3Q9BXA9 AL356321.1-201ENST00000621360 228 ntBASIC4.82□□□□□ -1.64
SALL3Q9BXA9 MIR4727-201ENST00000622232 55 ntBASIC4.82□□□□□ -1.64
SALL3Q9BXA9 BDP1P-201ENST00000582658 1990 ntBASIC4.82□□□□□ -1.64
SALL3Q9BXA9 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
SALL3Q9BXA9 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SALL3Q9BXA9 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
SALL3Q9BXA9 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
SALL3Q9BXA9 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
SALL3Q9BXA9 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.82□□□□□ -1.64
SALL3Q9BXA9 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 CR848007.1-201ENST00000442354 1699 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 OR10J6P-201ENST00000289731 930 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 Y_RNA.408-201ENST00000383987 102 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 RNU6-348P-201ENST00000384386 107 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 MIR217-201ENST00000384817 110 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 MIR181A1-201ENST00000385026 110 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 SNORA57.1-201ENST00000391227 145 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 MIR1251-201ENST00000408552 70 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 RN7SKP56-201ENST00000410513 331 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 AL450992.3-201ENST00000413192 568 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 RPL21P32-201ENST00000419877 477 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 Z93242.1-201ENST00000427102 353 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 RPS25P9-201ENST00000435591 252 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 MTND1P28-201ENST00000435623 950 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 RPS26P30-201ENST00000443431 335 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 RNU6-347P-201ENST00000516658 105 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 RNU6-352P-201ENST00000516908 107 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 AL353621.2-201ENST00000605340 133 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 AC016727.1-205ENST00000605437 569 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 MIR92B-201ENST00000607575 96 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 AC024560.3-201ENST00000608482 349 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 uc_338.9-201ENST00000617424 182 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 AC079684.1-201ENST00000621405 437 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 IPO8P1-201ENST00000455509 3109 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 SCN1A-220ENST00000641603 12506 ntBASIC4.81□□□□□ -1.64
SALL3Q9BXA9 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.81□□□□□ -1.64
SALL3Q9BXA9 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 RNY4P24-201ENST00000362735 96 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 RNU6-797P-201ENST00000363101 109 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 RNA5SP479-201ENST00000364858 117 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 Y_RNA.302-201ENST00000364997 102 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 RNU6-619P-201ENST00000365146 108 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 RNU6-114P-201ENST00000384704 105 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 RN7SKP247-201ENST00000411094 308 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 RN7SKP263-201ENST00000411194 309 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.8□□□□□ -1.64
SALL3Q9BXA9 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.8□□□□□ -1.64
SALL3Q9BXA9 AC245052.5-201ENST00000416320 649 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms