Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 AC016769.2-201ENST00000414815 475 ntBASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 DPPA2P2-201ENST00000418220 897 ntBASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 AC007161.1-204ENST00000423039 460 ntBASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 MED13P1-201ENST00000428342 171 ntBASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 AC073465.2-201ENST00000440938 498 ntBASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 AC083904.1-201ENST00000487828 231 ntBASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 COX7A2P2-201ENST00000505291 250 ntBASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 RNA5SP92-201ENST00000516437 110 ntBASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 SNORA70.20-201ENST00000516848 126 ntBASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 AL139124.1-201ENST00000609123 421 ntBASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 AC245517.5-201ENST00000611529 162 ntBASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 AC099494.2-201ENST00000623371 978 ntBASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TRIM56Q9BRZ2 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.59□□□□□ -1.52
TRIM56Q9BRZ2 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.59□□□□□ -1.52
TRIM56Q9BRZ2 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TRIM56Q9BRZ2 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
TRIM56Q9BRZ2 AC012618.3-205ENST00000637896 1496 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 HSPE1P11-201ENST00000339579 310 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 MIR323A-201ENST00000362199 86 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 Y_RNA.22-201ENST00000362492 102 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 RNU6-552P-201ENST00000362869 119 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 Y_RNA.197-201ENST00000364004 102 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 RNU6-522P-201ENST00000364497 107 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 U3.12-201ENST00000364498 214 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 Y_RNA.401-201ENST00000383965 117 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 SNORA16A-201ENST00000384342 137 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 RNU6-39P-201ENST00000384344 107 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 RNU6-1105P-201ENST00000384774 107 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 MIR19A-201ENST00000384878 82 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 PPIAP9-201ENST00000403866 498 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AL009179.1-201ENST00000406085 265 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 GPS2P1-201ENST00000411761 986 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 RNF10P1-201ENST00000418589 369 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AC079355.1-201ENST00000421770 223 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 RPS26P47-201ENST00000427219 348 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 RPS29P15-201ENST00000458329 171 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 RPL7L1P8-201ENST00000469911 741 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AC091912.1-201ENST00000511351 248 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 RPL39P5-202ENST00000512505 151 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 Y_RNA.720-201ENST00000517166 92 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 IGLVIV-53-201ENST00000520107 367 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AC022634.1-201ENST00000520765 532 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 MGST1-215ENST00000540056 546 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AC063949.1-201ENST00000552900 865 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 SNRPGP18-201ENST00000553000 214 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 DNAJC8P1-201ENST00000554535 372 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AP005403.1-201ENST00000579720 229 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AL355812.1-201ENST00000603215 216 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AC108738.1-201ENST00000603703 237 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AL121992.2-201ENST00000606262 256 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AC007546.1-201ENST00000619452 559 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 AC015908.5-201ENST00000623289 343 ntBASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.58□□□□□ -1.52
TRIM56Q9BRZ2 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms