Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.7□□□□□ -1.82
CPNE1Q99829 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CPNE1Q99829 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CPNE1Q99829 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CPNE1Q99829 RNU6-157P-201ENST00000383957 107 ntBASIC3.7□□□□□ -1.82
CPNE1Q99829 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CPNE1Q99829 RNU4-78P-201ENST00000410940 126 ntBASIC3.7□□□□□ -1.82
CPNE1Q99829 SNORA57.3-201ENST00000411095 141 ntBASIC3.7□□□□□ -1.82
CPNE1Q99829 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.7□□□□□ -1.82
CPNE1Q99829 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.7□□□□□ -1.82
CPNE1Q99829 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.7□□□□□ -1.82
CPNE1Q99829 RPS20P32-201ENST00000456044 356 ntBASIC3.7□□□□□ -1.82
CPNE1Q99829 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CPNE1Q99829 AC021146.8-201ENST00000507455 733 ntBASIC3.7□□□□□ -1.82
CPNE1Q99829 MRPS36P3-201ENST00000519284 130 ntBASIC3.7□□□□□ -1.82
CPNE1Q99829 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC3.7□□□□□ -1.82
CPNE1Q99829 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.7□□□□□ -1.82
CPNE1Q99829 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.7□□□□□ -1.82
CPNE1Q99829 OR5AP1P-201ENST00000529730 940 ntBASIC3.7□□□□□ -1.82
CPNE1Q99829 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CPNE1Q99829 AL139174.1-201ENST00000531489 886 ntBASIC3.7□□□□□ -1.82
CPNE1Q99829 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.7□□□□□ -1.82
CPNE1Q99829 DUXAP1-201ENST00000556632 463 ntBASIC3.7□□□□□ -1.82
CPNE1Q99829 MAGOH2P-202ENST00000584384 429 ntBASIC3.7□□□□□ -1.82
CPNE1Q99829 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.7□□□□□ -1.82
CPNE1Q99829 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.7□□□□□ -1.82
CPNE1Q99829 AL606490.9-201ENST00000603331 271 ntBASIC3.7□□□□□ -1.82
CPNE1Q99829 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
CPNE1Q99829 AP000770.2-201ENST00000623694 100 ntBASIC3.7□□□□□ -1.82
CPNE1Q99829 MIR6830-201ENST00000636015 70 ntBASIC3.7□□□□□ -1.82
CPNE1Q99829 AC138649.5-201ENST00000637456 137 ntBASIC3.7□□□□□ -1.82
CPNE1Q99829 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.7□□□□□ -1.82
CPNE1Q99829 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
CPNE1Q99829 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.7□□□□□ -1.82
CPNE1Q99829 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CPNE1Q99829 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CPNE1Q99829 AP002907.1-201ENST00000606361 1430 ntBASIC3.7□□□□□ -1.82
CPNE1Q99829 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.7□□□□□ -1.82
CPNE1Q99829 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.69□□□□□ -1.82
CPNE1Q99829 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.69□□□□□ -1.82
CPNE1Q99829 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CPNE1Q99829 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.69□□□□□ -1.82
CPNE1Q99829 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
CPNE1Q99829 U3.29-201ENST00000391296 212 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 SOD2P1-201ENST00000396543 562 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 HMGB1P17-201ENST00000403495 628 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 MTHFD2P2-201ENST00000407725 247 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 AC127526.1-201ENST00000417526 366 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 AL513174.1-201ENST00000423182 629 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 GLRXP1-201ENST00000423261 334 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 OR8F1P-201ENST00000425243 930 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 AC016712.1-201ENST00000431088 378 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 MTND1P32-201ENST00000433043 938 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 RPS25P9-201ENST00000435591 252 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 AC114755.5-201ENST00000447760 831 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 MTND2P19-201ENST00000449129 1012 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.69□□□□□ -1.82
CPNE1Q99829 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.69□□□□□ -1.82
CPNE1Q99829 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.69□□□□□ -1.82
CPNE1Q99829 AC087312.1-201ENST00000471411 480 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CPNE1Q99829 RPS3AP50-201ENST00000487064 803 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 AC090453.1-201ENST00000495560 436 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 TMEM251P1-201ENST00000503717 318 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.69□□□□□ -1.82
CPNE1Q99829 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.69□□□□□ -1.82
CPNE1Q99829 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.69□□□□□ -1.82
CPNE1Q99829 AC006499.2-201ENST00000513470 337 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 RN7SKP122-201ENST00000515923 296 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 SCARNA14-201ENST00000516903 136 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.69□□□□□ -1.82
CPNE1Q99829 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.69□□□□□ -1.82
CPNE1Q99829 PDCL2P2-201ENST00000533651 189 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
CPNE1Q99829 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.69□□□□□ -1.82
CPNE1Q99829 CYCSP30-201ENST00000546447 172 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.69□□□□□ -1.82
CPNE1Q99829 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.69□□□□□ -1.82
CPNE1Q99829 AC010928.3-201ENST00000587712 541 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.69□□□□□ -1.82
CPNE1Q99829 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.69□□□□□ -1.82
CPNE1Q99829 AC079395.3-201ENST00000615161 484 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 AC025588.4-201ENST00000615802 908 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 AC021755.4-201ENST00000616620 456 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 C2orf27A-204ENST00000623058 969 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 AL356863.1-201ENST00000623378 1080 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 AC231657.1-201ENST00000624313 397 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 AP000676.4-201ENST00000624659 623 ntBASIC3.69□□□□□ -1.82
CPNE1Q99829 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.69□□□□□ -1.82
CPNE1Q99829 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
CPNE1Q99829 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CPNE1Q99829 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.69□□□□□ -1.82
CPNE1Q99829 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
CPNE1Q99829 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CPNE1Q99829 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
CPNE1Q99829 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.69□□□□□ -1.82
CPNE1Q99829 MTND5P24-201ENST00000438892 1767 ntBASIC3.68□□□□□ -1.82
CPNE1Q99829 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CPNE1Q99829 HSPA8P1-201ENST00000425843 1833 ntBASIC3.68□□□□□ -1.82
CPNE1Q99829 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.68□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms