Protein–RNA interactions for Protein: Q99536

VAT1, Synaptic vesicle membrane protein VAT-1 homolog, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1Q99536 KRR1P1-201ENST00000419430 803 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.97□□□□□ -1.93
VAT1Q99536 RPL36P19-201ENST00000430744 301 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 ZNF965P-201ENST00000432501 817 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 HMGB1P12-201ENST00000438594 598 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.97□□□□□ -1.93
VAT1Q99536 AC112492.1-201ENST00000449607 712 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.97□□□□□ -1.93
VAT1Q99536 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.97□□□□□ -1.93
VAT1Q99536 AC008280.2-201ENST00000455473 307 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 NF1P3-201ENST00000457709 450 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 RPL21P41-201ENST00000459863 264 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 CAB39P1-201ENST00000502277 460 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 AC083906.5-201ENST00000503722 328 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.97□□□□□ -1.93
VAT1Q99536 AC118282.1-201ENST00000506408 765 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 AC008565.1-201ENST00000509046 885 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 AC008885.2-201ENST00000509506 930 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC2.97□□□□□ -1.93
VAT1Q99536 AC119751.1-201ENST00000513357 765 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 AC009812.2-201ENST00000517657 457 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.97□□□□□ -1.93
VAT1Q99536 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.97□□□□□ -1.93
VAT1Q99536 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.97□□□□□ -1.93
VAT1Q99536 MTCYBP28-201ENST00000566728 1132 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC2.97□□□□□ -1.93
VAT1Q99536 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.97□□□□□ -1.93
VAT1Q99536 AC008687.2-201ENST00000597865 520 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 AC015871.2-201ENST00000603605 948 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 AC007566.2-201ENST00000603642 413 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 AC007179.3-201ENST00000604976 235 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.97□□□□□ -1.93
VAT1Q99536 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 AC018926.3-201ENST00000618841 406 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.97□□□□□ -1.93
VAT1Q99536 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.97□□□□□ -1.93
VAT1Q99536 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
VAT1Q99536 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
VAT1Q99536 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
VAT1Q99536 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
VAT1Q99536 AC002546.1-201ENST00000588041 2504 ntBASIC2.96□□□□□ -1.93
VAT1Q99536 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.93
VAT1Q99536 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VAT1Q99536 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VAT1Q99536 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
VAT1Q99536 RNU6-252P-201ENST00000363232 107 ntBASIC2.96□□□□□ -1.94
VAT1Q99536 SNORD115-48-201ENST00000364764 76 ntBASIC2.96□□□□□ -1.94
VAT1Q99536 AC083799.1-201ENST00000366451 910 ntBASIC2.96□□□□□ -1.94
VAT1Q99536 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.96□□□□□ -1.94
VAT1Q99536 AC073264.1-201ENST00000411508 416 ntBASIC2.96□□□□□ -1.94
VAT1Q99536 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.96□□□□□ -1.94
VAT1Q99536 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC2.96□□□□□ -1.94
VAT1Q99536 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VAT1Q99536 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.96□□□□□ -1.94
VAT1Q99536 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.96□□□□□ -1.94
VAT1Q99536 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.96□□□□□ -1.94
VAT1Q99536 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC2.96□□□□□ -1.94
VAT1Q99536 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.96□□□□□ -1.94
VAT1Q99536 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.96□□□□□ -1.94
VAT1Q99536 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.96□□□□□ -1.94
VAT1Q99536 ARPC3P2-201ENST00000457786 533 ntBASIC2.96□□□□□ -1.94
VAT1Q99536 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.96□□□□□ -1.94
VAT1Q99536 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.96□□□□□ -1.94
VAT1Q99536 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.96□□□□□ -1.94
VAT1Q99536 LINC02316-201ENST00000553346 768 ntTSL 3 BASIC2.96□□□□□ -1.94
VAT1Q99536 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.96□□□□□ -1.94
VAT1Q99536 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.96□□□□□ -1.94
VAT1Q99536 AC067805.1-201ENST00000559344 470 ntBASIC2.96□□□□□ -1.94
VAT1Q99536 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.96□□□□□ -1.94
VAT1Q99536 AC005951.1-201ENST00000576706 485 ntBASIC2.96□□□□□ -1.94
VAT1Q99536 OR4G1P-201ENST00000588632 938 ntBASIC2.96□□□□□ -1.94
VAT1Q99536 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.96□□□□□ -1.94
VAT1Q99536 IGHV3-29-201ENST00000604817 344 ntBASIC2.96□□□□□ -1.94
VAT1Q99536 AL009028.1-201ENST00000604895 802 ntBASIC2.96□□□□□ -1.94
VAT1Q99536 AC096577.2-201ENST00000611455 153 ntBASIC2.96□□□□□ -1.94
VAT1Q99536 U73479.1-201ENST00000618062 168 ntBASIC2.96□□□□□ -1.94
VAT1Q99536 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.96□□□□□ -1.94
VAT1Q99536 AC091953.5-201ENST00000622919 233 ntBASIC2.96□□□□□ -1.94
VAT1Q99536 AC083865.1-201ENST00000636634 831 ntBASIC2.96□□□□□ -1.94
VAT1Q99536 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
VAT1Q99536 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.96□□□□□ -1.94
VAT1Q99536 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.96□□□□□ -1.94
VAT1Q99536 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
VAT1Q99536 AC108206.1-201ENST00000570186 4159 ntBASIC2.96□□□□□ -1.94
VAT1Q99536 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
VAT1Q99536 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
VAT1Q99536 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.95□□□□□ -1.94
VAT1Q99536 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.95□□□□□ -1.94
VAT1Q99536 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.95□□□□□ -1.94
VAT1Q99536 GABRG2-229ENST00000641017 3628 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
VAT1Q99536 MIR512-1-201ENST00000384913 84 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.95□□□□□ -1.94
VAT1Q99536 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.95□□□□□ -1.94
VAT1Q99536 MTND4P24-201ENST00000424002 397 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 OR2B8P-201ENST00000432841 938 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 UBE2V1P5-201ENST00000440070 405 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.95□□□□□ -1.94
VAT1Q99536 RPL7P52-201ENST00000449200 742 ntBASIC2.95□□□□□ -1.94
VAT1Q99536 AC104978.1-201ENST00000449387 391 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms