Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 AC007823.1-201ENST00000569932 1566 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 SNORD116.1-201ENST00000365628 92 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 RNU6-444P-201ENST00000383988 108 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AC073264.1-201ENST00000411508 416 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 EI24P1-201ENST00000416584 867 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 RPS3AP9-201ENST00000417027 792 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AC245054.1-201ENST00000420944 258 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 RPL7P53-201ENST00000421245 739 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 Z93242.1-201ENST00000427102 353 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 SNORA71B-202ENST00000439232 272 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AC079776.3-201ENST00000450665 370 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AC068587.2-201ENST00000478386 781 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AC078918.1-201ENST00000498515 228 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AC005921.1-201ENST00000510589 286 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 RAC1P2-201ENST00000511164 579 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 RNU6-202P-201ENST00000515998 96 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AC023050.2-201ENST00000544968 387 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 EIF5A2P1-201ENST00000564027 460 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AP001269.3-201ENST00000588718 329 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AC091057.2-201ENST00000602594 792 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AL163642.2-201ENST00000604722 1019 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AC006077.1-201ENST00000604746 343 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AC025588.2-201ENST00000604851 466 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 YPEL5P2-201ENST00000605553 359 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 AC024257.5-201ENST00000612739 531 ntBASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.82□□□□□ -1.8
NECTIN4Q96NY8 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 AC058791.1-201ENST00000608412 3198 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 RNA5SP189-201ENST00000364920 115 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 MIR128-1-201ENST00000384921 82 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 SOD2P1-201ENST00000396543 562 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 TMSB4XP8-201ENST00000402089 135 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 SSXP10-201ENST00000402595 565 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 TMSB4XP6-201ENST00000415187 135 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 HMGB1P49-201ENST00000418882 569 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 TEX41-204ENST00000423031 491 ntTSL 4 BASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 TMSB4XP1-201ENST00000424567 135 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 KCTD9P3-201ENST00000434597 1169 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 PPIAP17-201ENST00000438507 471 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 MTND1P26-201ENST00000440488 538 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 HMGB1P16-201ENST00000447155 540 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 COX6CP18-201ENST00000448769 222 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 AC084198.1-201ENST00000477747 402 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 RPL7P24-201ENST00000493052 752 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 AC021146.5-201ENST00000503544 545 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 RNU2-58P-201ENST00000516403 183 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 AL121766.1-201ENST00000547436 487 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 AC090695.1-201ENST00000561269 1222 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 AC010928.3-201ENST00000587712 541 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 CLIC4P2-201ENST00000601934 717 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 AL137849.1-201ENST00000604767 169 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 AL513477.2-201ENST00000607858 568 ntBASIC3.81□□□□□ -1.8
NECTIN4Q96NY8 AC023158.2-201ENST00000614876 543 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms