Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 Y_RNA.162-201ENST00000363683 102 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 RNU6-1103P-201ENST00000384150 107 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 Y_RNA.548-201ENST00000384656 105 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 RPS4XP9-201ENST00000405151 780 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AL035079.1-201ENST00000405210 287 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 RPS16P5-201ENST00000406501 404 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 RN7SKP16-201ENST00000410180 299 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AL136133.1-201ENST00000413694 376 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AC007390.1-201ENST00000415722 356 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AC119751.6-201ENST00000416712 186 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 BX295541.1-201ENST00000417774 250 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 HMGB3P20-201ENST00000417997 600 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AC092634.6-201ENST00000418558 192 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 ZNF90P2-204ENST00000419323 1075 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 RPS12P23-201ENST00000419579 400 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AL513185.2-201ENST00000425543 193 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AC092809.1-201ENST00000441469 474 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 RAD23BP3-201ENST00000454157 1152 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AC022364.2-201ENST00000457963 554 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AC091180.1-201ENST00000462104 372 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AC015724.1-201ENST00000478577 156 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 MTND5P4-201ENST00000514978 288 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 RNU6-583P-201ENST00000516012 92 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 SNORA48.10-201ENST00000516965 160 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 LY96-202ENST00000518893 430 ntTSL 3 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 PTP4A1P6-201ENST00000531034 478 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 ARL2BPP2-201ENST00000550907 489 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AL352979.3-201ENST00000553515 247 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 NDUFB4P11-201ENST00000560510 395 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AC025678.1-201ENST00000567861 338 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AC090312.2-201ENST00000582687 378 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AC055876.5-201ENST00000605667 259 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AC018926.3-201ENST00000618841 406 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.02□□□□□ -1.77
ZNF48Q96MX3 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.02□□□□□ -1.77
ZNF48Q96MX3 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF48Q96MX3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.01□□□□□ -1.77
ZNF48Q96MX3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
ZNF48Q96MX3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.01□□□□□ -1.77
ZNF48Q96MX3 AC119744.1-201ENST00000454746 1715 ntBASIC4.01□□□□□ -1.77
ZNF48Q96MX3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF48Q96MX3 MAPK10-320ENST00000641462 6696 ntBASIC4.01□□□□□ -1.77
ZNF48Q96MX3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.01□□□□□ -1.77
ZNF48Q96MX3 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
ZNF48Q96MX3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
ZNF48Q96MX3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.01□□□□□ -1.77
ZNF48Q96MX3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
ZNF48Q96MX3 Y_RNA.1-201ENST00000352915 104 ntBASIC4.01□□□□□ -1.77
ZNF48Q96MX3 RNA5SP28-201ENST00000363841 119 ntBASIC4.01□□□□□ -1.77
ZNF48Q96MX3 RNU6-533P-201ENST00000384144 107 ntBASIC4.01□□□□□ -1.77
ZNF48Q96MX3 Y_RNA.460-201ENST00000384255 102 ntBASIC4.01□□□□□ -1.77
ZNF48Q96MX3 RNU6-809P-201ENST00000384461 107 ntBASIC4.01□□□□□ -1.77
ZNF48Q96MX3 SNORA70.10-201ENST00000384515 134 ntBASIC4.01□□□□□ -1.77
ZNF48Q96MX3 MIR1302-11-201ENST00000408051 138 ntBASIC4.01□□□□□ -1.77
ZNF48Q96MX3 MIR1302-9-201ENST00000408365 138 ntBASIC4.01□□□□□ -1.77
ZNF48Q96MX3 MIR1302-10-201ENST00000408734 138 ntBASIC4.01□□□□□ -1.77
ZNF48Q96MX3 RN7SKP100-201ENST00000411258 284 ntBASIC4.01□□□□□ -1.77
ZNF48Q96MX3 RAB28P1-201ENST00000411517 641 ntBASIC4.01□□□□□ -1.77
ZNF48Q96MX3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC4.01□□□□□ -1.77
ZNF48Q96MX3 BTF3L4P3-201ENST00000418879 476 ntBASIC4.01□□□□□ -1.77
ZNF48Q96MX3 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.01□□□□□ -1.77
ZNF48Q96MX3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.01□□□□□ -1.77
ZNF48Q96MX3 USP9YP36-201ENST00000424581 829 ntBASIC4.01□□□□□ -1.77
ZNF48Q96MX3 RPL7P4-203ENST00000430239 730 ntBASIC4.01□□□□□ -1.77
ZNF48Q96MX3 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.01□□□□□ -1.77
ZNF48Q96MX3 AC109583.1-201ENST00000432156 268 ntBASIC4.01□□□□□ -1.77
ZNF48Q96MX3 RPL21P133-201ENST00000443666 476 ntBASIC4.01□□□□□ -1.77
ZNF48Q96MX3 AC079448.1-201ENST00000449377 373 ntBASIC4.01□□□□□ -1.77
ZNF48Q96MX3 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms