Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC009237.15-201ENST00000610252 501 ntBASIC2.6□□□□□ -1.99
LINC00477Q96M19 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
LINC00477Q96M19 AL078595.3-201ENST00000623815 1166 ntBASIC2.6□□□□□ -1.99
LINC00477Q96M19 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC2.6□□□□□ -1.99
LINC00477Q96M19 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.6□□□□□ -1.99
LINC00477Q96M19 AC099654.9-201ENST00000637055 678 ntBASIC2.6□□□□□ -1.99
LINC00477Q96M19 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.6□□□□□ -1.99
LINC00477Q96M19 AL355578.1-201ENST00000607405 1328 ntBASIC2.6□□□□□ -1.99
LINC00477Q96M19 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
LINC00477Q96M19 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
LINC00477Q96M19 MAPK10-322ENST00000641485 4530 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.59□□□□□ -1.99
LINC00477Q96M19 AC032011.1-201ENST00000611703 1549 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.59□□□□□ -1.99
LINC00477Q96M19 AC007823.1-201ENST00000569932 1566 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
LINC00477Q96M19 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
LINC00477Q96M19 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
LINC00477Q96M19 RNU6-1077P-201ENST00000410506 102 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 RNA5SP31-201ENST00000411144 127 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 RNA5SP107-201ENST00000411358 122 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 OR51A3P-201ENST00000413596 924 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.59□□□□□ -1.99
LINC00477Q96M19 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.59□□□□□ -1.99
LINC00477Q96M19 TOMM22P1-201ENST00000418578 312 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.59□□□□□ -1.99
LINC00477Q96M19 HSPE1P1-201ENST00000421494 318 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 PTP4A1P7-201ENST00000423476 514 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.59□□□□□ -1.99
LINC00477Q96M19 AC233728.2-201ENST00000425348 757 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 RAC1P8-201ENST00000427086 527 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC2.59□□□□□ -1.99
LINC00477Q96M19 MTCYBP15-201ENST00000433123 1127 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 BX679664.1-201ENST00000434429 253 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 PTGES3P1-201ENST00000439531 483 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC2.59□□□□□ -1.99
LINC00477Q96M19 TRIM60P18-201ENST00000441518 828 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 MTCO1P53-201ENST00000441633 699 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 RPL7P59-201ENST00000447700 943 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 AC097262.1-201ENST00000452559 548 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 AC007967.1-201ENST00000455422 1159 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 BX248409.1-201ENST00000455497 255 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 snoU13.24-201ENST00000458998 104 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 AC108860.1-201ENST00000484521 383 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 AC026414.1-201ENST00000504046 698 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC2.59□□□□□ -1.99
LINC00477Q96M19 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.59□□□□□ -1.99
LINC00477Q96M19 RNU6-885P-201ENST00000516607 104 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 snoZ278.1-201ENST00000517059 112 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 RNU6-711P-201ENST00000517255 106 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.59□□□□□ -1.99
LINC00477Q96M19 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC2.59□□□□□ -1.99
LINC00477Q96M19 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC2.59□□□□□ -1.99
LINC00477Q96M19 NDUFS5P6-201ENST00000529136 295 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.59□□□□□ -1.99
LINC00477Q96M19 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.59□□□□□ -1.99
LINC00477Q96M19 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
LINC00477Q96M19 AC015688.2-201ENST00000584523 262 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC2.59□□□□□ -1.99
LINC00477Q96M19 VN1R87P-201ENST00000596706 487 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 YWHAQP7-201ENST00000603536 658 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 AL583856.2-201ENST00000606298 543 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.59□□□□□ -1.99
LINC00477Q96M19 AC016597.2-201ENST00000613256 341 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 AL050303.3-201ENST00000613704 284 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 AL590240.3-201ENST00000621416 943 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC2.59□□□□□ -1.99
LINC00477Q96M19 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC2.59□□□□□ -1.99
LINC00477Q96M19 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.59□□□□□ -2
LINC00477Q96M19 MTCO1P6-201ENST00000481192 1384 ntBASIC2.59□□□□□ -2
LINC00477Q96M19 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.59□□□□□ -2
LINC00477Q96M19 OSBPL9P4-201ENST00000371707 1800 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 API5P2-201ENST00000397055 1498 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC2.58□□□□□ -2
LINC00477Q96M19 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
LINC00477Q96M19 UBE2Q2P1-202ENST00000354771 883 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 SNORD9-201ENST00000362566 104 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 RNA5SP383-201ENST00000362934 120 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 RNU6-707P-201ENST00000364647 95 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.58□□□□□ -2
LINC00477Q96M19 DYNLT3P1-201ENST00000378574 347 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 RNU1-101P-201ENST00000391171 127 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 AL591034.1-201ENST00000407447 340 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 RNU4-22P-201ENST00000411058 166 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.58□□□□□ -2
LINC00477Q96M19 ATP5A1P2-201ENST00000412323 255 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 AC126124.2-201ENST00000413542 321 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC2.58□□□□□ -2
LINC00477Q96M19 AL356968.1-201ENST00000416622 474 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 DBIP2-201ENST00000419076 262 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.58□□□□□ -2
LINC00477Q96M19 AC245291.1-201ENST00000419501 328 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 AC012498.1-201ENST00000424037 437 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.58□□□□□ -2
LINC00477Q96M19 RPP40P1-201ENST00000426762 456 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 AC004975.1-201ENST00000428733 208 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 RPL31P54-201ENST00000429803 370 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 UBE2V1P1-201ENST00000430836 445 ntBASIC2.58□□□□□ -2
LINC00477Q96M19 GTF2IP3-201ENST00000433887 494 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms