Protein–RNA interactions for Protein: Q96KN3

PKNOX2, Homeobox protein PKNOX2, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX2Q96KN3 AL035458.1-201ENST00000433096 585 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 MTND5P8-201ENST00000449817 1083 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 RPS29P22-201ENST00000472363 168 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 KC877373.1-201ENST00000479066 408 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 AP004217.1-201ENST00000480579 346 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 AC096751.1-202ENST00000502691 1067 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 AC114322.1-201ENST00000506771 926 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 RNA5SP217-201ENST00000515959 91 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 SNORA31.13-201ENST00000516624 135 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 AC010306.1-201ENST00000523223 1117 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 MIR5187-201ENST00000583479 76 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 AC006130.2-201ENST00000586202 326 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 NRBF2P5-201ENST00000603087 788 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 AC015849.2-201ENST00000605738 409 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 AC069209.1-201ENST00000619282 651 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 OR52H1-202ENST00000641796 1061 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 AC244517.1-201ENST00000606030 2086 ntBASIC3.59□□□□□ -1.83
PKNOX2Q96KN3 PABPC1P9-201ENST00000426076 1612 ntBASIC3.59□□□□□ -1.84
PKNOX2Q96KN3 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
PKNOX2Q96KN3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
PKNOX2Q96KN3 Z82195.2-201ENST00000612348 18351 ntBASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 OR5T3-201ENST00000303059 1023 ntBASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 SNORD51.1-201ENST00000365405 77 ntBASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 RNU6-761P-201ENST00000384148 107 ntBASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 MIR1303-201ENST00000408625 86 ntBASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 RPL26P29-201ENST00000415623 438 ntBASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 Z75741.2-201ENST00000417272 1167 ntBASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 CR848007.2-201ENST00000424918 787 ntBASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 FO393419.3-201ENST00000428741 282 ntBASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 HSFY3P-201ENST00000444242 1191 ntBASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 RPS15AP34-201ENST00000487776 387 ntBASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 AC008885.2-201ENST00000509506 930 ntBASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 RN7SKP141-201ENST00000516167 338 ntBASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 CYCSP30-201ENST00000546447 172 ntBASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 MIR3939-201ENST00000582614 106 ntBASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 AC011890.2-201ENST00000613393 294 ntBASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.58□□□□□ -1.84
PKNOX2Q96KN3 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 RNA5SP124-201ENST00000362739 110 ntBASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 SNORA62-201ENST00000365493 153 ntBASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 U3.29-201ENST00000391296 212 ntBASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 RPS20P25-201ENST00000412447 352 ntBASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 MTND4P24-201ENST00000424002 397 ntBASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 ZNF271P-202ENST00000465539 1970 ntBASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 ST13P14-201ENST00000474095 734 ntBASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 AC090525.1-201ENST00000479116 478 ntBASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 AC113155.1-201ENST00000511141 769 ntBASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 FTH1P21-201ENST00000512179 511 ntBASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 AC109329.2-201ENST00000519658 482 ntBASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 AP000790.1-201ENST00000528891 737 ntBASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 AC121758.2-201ENST00000553271 193 ntBASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 HSPE1P7-201ENST00000604681 321 ntBASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 AC079791.1-201ENST00000605356 973 ntBASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 AC104237.2-201ENST00000612456 443 ntBASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 AC020658.4-201ENST00000613987 684 ntBASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 FP236240.3-201ENST00000623061 327 ntBASIC3.57□□□□□ -1.84
PKNOX2Q96KN3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
PKNOX2Q96KN3 ZNF90P1-201ENST00000480493 1951 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 140 ms