Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MIR320C1-201ENST00000408566 88 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS50Q96JG6 RPS27AP7-201ENST00000422792 455 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 AL356583.2-201ENST00000426536 280 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 C4BPAP2-201ENST00000428434 478 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS50Q96JG6 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS50Q96JG6 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS50Q96JG6 AC005297.2-201ENST00000450430 606 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS50Q96JG6 AC079168.2-201ENST00000453977 416 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 MTCYBP1-201ENST00000454315 1119 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 RN7SL459P-201ENST00000481078 302 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS50Q96JG6 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS50Q96JG6 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.38□□□□□ -1.71
VPS50Q96JG6 AC010460.1-201ENST00000507087 466 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS50Q96JG6 FABP5P5-201ENST00000515537 406 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS50Q96JG6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS50Q96JG6 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.38□□□□□ -1.71
VPS50Q96JG6 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.38□□□□□ -1.71
VPS50Q96JG6 AC027807.1-201ENST00000559921 996 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS50Q96JG6 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS50Q96JG6 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS50Q96JG6 MIR4528-201ENST00000577763 90 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 MIR5697-201ENST00000578045 78 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 AC091178.1-203ENST00000584586 279 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 SEPT7P9-203ENST00000604116 343 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 AC107304.1-201ENST00000604229 296 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 BCRP9-201ENST00000605312 388 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 AC098614.4-201ENST00000607601 462 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 AC006566.1-201ENST00000608943 513 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 AC013476.2-201ENST00000614456 459 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 AC138932.5-201ENST00000617759 563 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS50Q96JG6 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS50Q96JG6 AC016588.2-201ENST00000632484 3021 ntBASIC4.38□□□□□ -1.71
VPS50Q96JG6 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS50Q96JG6 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 MIR124-3-201ENST00000384866 87 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 AL590762.2-201ENST00000395798 571 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 RN7SKP177-201ENST00000410567 355 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 COX6CP15-201ENST00000426313 211 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC011998.1-201ENST00000433403 117 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 SNRPEP7-201ENST00000438350 220 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 SRRM1P2-201ENST00000464531 1192 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC012170.1-201ENST00000495139 359 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC090453.1-201ENST00000495560 436 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC021678.1-201ENST00000505195 936 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 MTND2P33-201ENST00000506452 1031 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 AL592156.1-201ENST00000508758 304 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 POU5F1P7-201ENST00000508759 541 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 AF213884.2-201ENST00000510417 903 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 RNA5SP446-201ENST00000515955 82 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 AP003392.2-201ENST00000527269 208 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC107016.1-201ENST00000550463 337 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC245505.1-201ENST00000556398 224 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 EIF1P4-201ENST00000572664 335 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 MIR4307-201ENST00000582802 84 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC005771.1-201ENST00000585581 349 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 RPL7P50-201ENST00000600588 727 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC091805.2-201ENST00000603848 235 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 AL356218.2-201ENST00000605264 187 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC104010.1-201ENST00000616889 150 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 AL603839.4-201ENST00000624658 1005 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 AL049536.1-201ENST00000625043 744 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS50Q96JG6 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
VPS50Q96JG6 EIF2AP4-201ENST00000424793 1781 ntBASIC4.37□□□□□ -1.71
VPS50Q96JG6 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VPS50Q96JG6 AC027514.1-201ENST00000588561 1603 ntBASIC4.36□□□□□ -1.71
VPS50Q96JG6 RPL23AP57-201ENST00000332361 466 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms