Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 AL162151.2-201ENST00000448875 158 ntBASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 RPS27AP8-201ENST00000452665 445 ntBASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 AC146944.2-203ENST00000502493 354 ntBASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 AL592156.1-201ENST00000508758 304 ntBASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 AC139495.1-202ENST00000513164 354 ntBASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 RN7SKP116-201ENST00000516902 319 ntBASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 AC008694.2-201ENST00000517591 306 ntBASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 HSPE1P3-201ENST00000559254 309 ntBASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 MIR4644-201ENST00000579929 84 ntBASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 DUXAP11-201ENST00000603858 526 ntBASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 AC025588.4-201ENST00000615802 908 ntBASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 FP325313.1-201ENST00000638228 703 ntBASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 MTND4P16-201ENST00000466108 1367 ntBASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
SH3KBP1Q96B97 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AL158163.1-201ENST00000603915 1649 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 RNA5SP52-201ENST00000362448 134 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 RNU4-40P-201ENST00000364351 143 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 RNU6-723P-201ENST00000383973 107 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 RNU6-1181P-201ENST00000384191 106 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 RNU6-952P-201ENST00000391164 108 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 MTND4LP20-201ENST00000402379 270 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 VN1R8P-201ENST00000407739 893 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 RNU4-78P-201ENST00000410940 126 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AL049610.1-201ENST00000423374 372 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AC004975.1-201ENST00000428733 208 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 RPEP2-201ENST00000432149 701 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AL590103.1-201ENST00000434488 307 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AL353748.1-201ENST00000440753 474 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AC114755.5-201ENST00000447760 831 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 ZNF114P1-201ENST00000453500 292 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AL122001.1-201ENST00000457027 370 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 KCTD9P2-201ENST00000512203 1013 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AC022861.1-201ENST00000522981 663 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 MTCYBP41-201ENST00000528913 1123 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AC091515.1-201ENST00000548110 679 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 TVP23BP1-201ENST00000557500 617 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AL121834.1-201ENST00000572284 509 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 ANKRD36BP2-206ENST00000575193 1245 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 VN1R92P-201ENST00000598511 928 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 RPL23AP92-201ENST00000603609 255 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 HMGN2P28-201ENST00000606102 262 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AC080013.4-201ENST00000607624 649 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AC103710.4-201ENST00000609301 899 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AL392048.1-201ENST00000613946 534 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AC073968.1-201ENST00000618594 637 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 MIR7154-201ENST00000620673 73 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AC009039.2-201ENST00000624524 529 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 PCMTD1P7-201ENST00000634506 357 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 AP001148.1-201ENST00000624124 2359 ntBASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SH3KBP1Q96B97 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 152.2 ms