Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 AL139395.1-201ENST00000603662 160 ntBASIC2.47□□□□□ -2.01
TTC28Q96AY4 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC2.47□□□□□ -2.01
TTC28Q96AY4 AL353684.1-201ENST00000622677 1120 ntBASIC2.47□□□□□ -2.01
TTC28Q96AY4 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
TTC28Q96AY4 AC017007.4-201ENST00000503353 1352 ntBASIC2.46□□□□□ -2.01
TTC28Q96AY4 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC2.46□□□□□ -2.02
TTC28Q96AY4 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC2.46□□□□□ -2.02
TTC28Q96AY4 AC080013.2-201ENST00000460866 323 ntBASIC2.46□□□□□ -2.02
TTC28Q96AY4 ENSA-210ENST00000503241 574 ntTSL 3 BASIC2.46□□□□□ -2.02
TTC28Q96AY4 ACTR6P1-201ENST00000514311 1104 ntBASIC2.46□□□□□ -2.02
TTC28Q96AY4 OR8L1P-201ENST00000534005 955 ntBASIC2.46□□□□□ -2.02
TTC28Q96AY4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.46□□□□□ -2.02
TTC28Q96AY4 CR589904.2-201ENST00000612533 440 ntBASIC2.46□□□□□ -2.02
TTC28Q96AY4 AC010378.1-201ENST00000619270 362 ntBASIC2.46□□□□□ -2.02
TTC28Q96AY4 CR381653.2-201ENST00000624041 768 ntBASIC2.46□□□□□ -2.02
TTC28Q96AY4 MTND5P29-201ENST00000458676 1807 ntBASIC2.46□□□□□ -2.02
TTC28Q96AY4 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.46□□□□□ -2.02
TTC28Q96AY4 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
TTC28Q96AY4 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
TTC28Q96AY4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC2.46□□□□□ -2.02
TTC28Q96AY4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
TTC28Q96AY4 AP000526.1-201ENST00000603308 1388 ntBASIC2.46□□□□□ -2.02
TTC28Q96AY4 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
TTC28Q96AY4 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.46□□□□□ -2.02
TTC28Q96AY4 RPL23AP76-201ENST00000441860 458 ntBASIC2.46□□□□□ -2.02
TTC28Q96AY4 MTND2P25-201ENST00000449028 610 ntBASIC2.46□□□□□ -2.02
TTC28Q96AY4 RPL5P30-201ENST00000465511 891 ntBASIC2.46□□□□□ -2.02
TTC28Q96AY4 AC011611.5-201ENST00000552477 578 ntBASIC2.46□□□□□ -2.02
TTC28Q96AY4 MIR4635-201ENST00000583759 79 ntBASIC2.46□□□□□ -2.02
TTC28Q96AY4 AC010338.1-201ENST00000621823 717 ntBASIC2.46□□□□□ -2.02
TTC28Q96AY4 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
TTC28Q96AY4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
TTC28Q96AY4 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
TTC28Q96AY4 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.45□□□□□ -2.02
TTC28Q96AY4 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC2.45□□□□□ -2.02
TTC28Q96AY4 GLRXP1-201ENST00000423261 334 ntBASIC2.45□□□□□ -2.02
TTC28Q96AY4 RPL7P54-201ENST00000438336 674 ntBASIC2.45□□□□□ -2.02
TTC28Q96AY4 RN7SL633P-201ENST00000488974 297 ntBASIC2.45□□□□□ -2.02
TTC28Q96AY4 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.45□□□□□ -2.02
TTC28Q96AY4 AC021146.8-201ENST00000507455 733 ntBASIC2.45□□□□□ -2.02
TTC28Q96AY4 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.45□□□□□ -2.02
TTC28Q96AY4 OR5D17P-201ENST00000531492 978 ntBASIC2.45□□□□□ -2.02
TTC28Q96AY4 MEG8-218ENST00000556720 456 ntTSL 3 BASIC2.45□□□□□ -2.02
TTC28Q96AY4 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC2.45□□□□□ -2.02
TTC28Q96AY4 AP001521.1-201ENST00000609150 300 ntBASIC2.45□□□□□ -2.02
TTC28Q96AY4 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.45□□□□□ -2.02
TTC28Q96AY4 RNU1-91P-201ENST00000364746 163 ntBASIC2.45□□□□□ -2.02
TTC28Q96AY4 AP000275.1-201ENST00000411943 390 ntBASIC2.45□□□□□ -2.02
TTC28Q96AY4 KATNBL1P2-201ENST00000433311 835 ntBASIC2.45□□□□□ -2.02
TTC28Q96AY4 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.45□□□□□ -2.02
TTC28Q96AY4 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.45□□□□□ -2.02
TTC28Q96AY4 AC100870.1-201ENST00000522035 505 ntBASIC2.45□□□□□ -2.02
TTC28Q96AY4 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC2.45□□□□□ -2.02
TTC28Q96AY4 AL354943.1-201ENST00000572103 781 ntBASIC2.45□□□□□ -2.02
TTC28Q96AY4 MIR6504-201ENST00000613520 61 ntBASIC2.45□□□□□ -2.02
TTC28Q96AY4 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.45□□□□□ -2.02
TTC28Q96AY4 AL031985.3-201ENST00000565390 2449 ntBASIC2.45□□□□□ -2.02
TTC28Q96AY4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
TTC28Q96AY4 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC2.44□□□□□ -2.02
TTC28Q96AY4 AL023284.1-201ENST00000403956 276 ntBASIC2.44□□□□□ -2.02
TTC28Q96AY4 AC006960.1-201ENST00000419980 153 ntBASIC2.44□□□□□ -2.02
TTC28Q96AY4 RPS29P6-201ENST00000438196 145 ntBASIC2.44□□□□□ -2.02
TTC28Q96AY4 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.44□□□□□ -2.02
TTC28Q96AY4 AC025881.1-201ENST00000518851 512 ntBASIC2.44□□□□□ -2.02
TTC28Q96AY4 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC2.44□□□□□ -2.02
TTC28Q96AY4 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.44□□□□□ -2.02
TTC28Q96AY4 AC103858.2-201ENST00000621471 543 ntBASIC2.44□□□□□ -2.02
TTC28Q96AY4 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC2.44□□□□□ -2.02
TTC28Q96AY4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.44□□□□□ -2.02
TTC28Q96AY4 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.44□□□□□ -2.02
TTC28Q96AY4 TRMT112P2-201ENST00000512910 132 ntBASIC2.44□□□□□ -2.02
TTC28Q96AY4 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.44□□□□□ -2.02
TTC28Q96AY4 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC2.44□□□□□ -2.02
TTC28Q96AY4 RPS3AP4-201ENST00000555161 764 ntBASIC2.44□□□□□ -2.02
TTC28Q96AY4 AC103968.1-201ENST00000557841 573 ntBASIC2.44□□□□□ -2.02
TTC28Q96AY4 TGIF1P1-201ENST00000558095 802 ntBASIC2.44□□□□□ -2.02
TTC28Q96AY4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC2.44□□□□□ -2.02
TTC28Q96AY4 AC002064.3-201ENST00000623448 346 ntBASIC2.44□□□□□ -2.02
TTC28Q96AY4 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
TTC28Q96AY4 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
TTC28Q96AY4 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
TTC28Q96AY4 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.43□□□□□ -2.02
TTC28Q96AY4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TTC28Q96AY4 RN7SKP44-201ENST00000363602 316 ntBASIC2.43□□□□□ -2.02
TTC28Q96AY4 Y_RNA.191-201ENST00000363972 113 ntBASIC2.43□□□□□ -2.02
TTC28Q96AY4 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.43□□□□□ -2.02
TTC28Q96AY4 USP9YP20-201ENST00000419224 558 ntBASIC2.43□□□□□ -2.02
TTC28Q96AY4 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.43□□□□□ -2.02
TTC28Q96AY4 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.43□□□□□ -2.02
TTC28Q96AY4 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.43□□□□□ -2.02
TTC28Q96AY4 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC2.43□□□□□ -2.02
TTC28Q96AY4 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC2.43□□□□□ -2.02
TTC28Q96AY4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
TTC28Q96AY4 SKINT1L-201ENST00000401057 817 ntBASIC2.43□□□□□ -2.02
TTC28Q96AY4 AC245054.2-201ENST00000415639 319 ntBASIC2.43□□□□□ -2.02
TTC28Q96AY4 PTP4A1P7-201ENST00000423476 514 ntBASIC2.43□□□□□ -2.02
TTC28Q96AY4 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC2.43□□□□□ -2.02
TTC28Q96AY4 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.43□□□□□ -2.02
TTC28Q96AY4 AL591719.1-201ENST00000444669 744 ntBASIC2.43□□□□□ -2.02
TTC28Q96AY4 AC104389.3-201ENST00000445629 235 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 152.9 ms