Protein–RNA interactions for Protein: Q92994

BRF1, Transcription factor IIIB 90 kDa subunit, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1Q92994 TRBV26-201ENST00000456572 344 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 RPL36AP51-201ENST00000487216 318 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 AC079382.1-201ENST00000493346 557 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 AC034222.1-201ENST00000494052 532 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.47□□□□□ -1.53
BRF1Q92994 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.47□□□□□ -1.53
BRF1Q92994 Vault.3-201ENST00000516676 95 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.47□□□□□ -1.53
BRF1Q92994 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC5.47□□□□□ -1.53
BRF1Q92994 AP000859.1-201ENST00000525536 307 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 OR5AN2P-201ENST00000534535 896 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
BRF1Q92994 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC5.47□□□□□ -1.53
BRF1Q92994 HSPE1P14-201ENST00000605812 302 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 MIR98-201ENST00000606724 119 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 FAM25E-202ENST00000608562 189 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 AC093788.1-201ENST00000609356 927 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 BX664608.1-201ENST00000610519 487 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 AC009159.1-201ENST00000618386 642 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 AC068722.2-201ENST00000618734 544 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.47□□□□□ -1.53
BRF1Q92994 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.47□□□□□ -1.53
BRF1Q92994 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.47□□□□□ -1.53
BRF1Q92994 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.47□□□□□ -1.53
BRF1Q92994 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.47□□□□□ -1.53
BRF1Q92994 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.53
BRF1Q92994 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
BRF1Q92994 AC024560.2-201ENST00000507981 1497 ntBASIC5.46□□□□□ -1.53
BRF1Q92994 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.46□□□□□ -1.53
BRF1Q92994 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
BRF1Q92994 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
BRF1Q92994 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.46□□□□□ -1.54
BRF1Q92994 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
BRF1Q92994 AC093775.1-201ENST00000624154 1868 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.46□□□□□ -1.54
BRF1Q92994 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
BRF1Q92994 SNORA58B-201ENST00000364259 136 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 RNU6-282P-201ENST00000365357 103 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 RNU6-744P-201ENST00000365557 107 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
BRF1Q92994 RNU1-39P-201ENST00000383897 165 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 RNU6-116P-201ENST00000384042 109 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 RNU6-1316P-201ENST00000384242 108 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 MRPL42P2-201ENST00000403169 426 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 RNA5SP118-201ENST00000410385 109 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 AC016831.4-201ENST00000438302 307 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.46□□□□□ -1.54
BRF1Q92994 SDCBPP1-201ENST00000440192 890 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 AC093019.1-201ENST00000443135 252 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.46□□□□□ -1.54
BRF1Q92994 SNRPGP6-201ENST00000451124 220 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.46□□□□□ -1.54
BRF1Q92994 PABPC1P3-201ENST00000469174 459 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 AC006511.1-201ENST00000470614 315 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.46□□□□□ -1.54
BRF1Q92994 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.46□□□□□ -1.54
BRF1Q92994 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
BRF1Q92994 MTCO2P30-201ENST00000503662 364 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.46□□□□□ -1.54
BRF1Q92994 RNU6-714P-201ENST00000516963 103 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 AC022861.1-201ENST00000522981 663 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.46□□□□□ -1.54
BRF1Q92994 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.46□□□□□ -1.54
BRF1Q92994 OR5AL2P-201ENST00000532185 920 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.46□□□□□ -1.54
BRF1Q92994 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.46□□□□□ -1.54
BRF1Q92994 AC018552.1-201ENST00000562099 811 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC5.46□□□□□ -1.54
BRF1Q92994 AC091042.1-201ENST00000579213 173 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 AL353997.4-201ENST00000586196 166 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 AC006272.2-201ENST00000594725 163 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.46□□□□□ -1.54
BRF1Q92994 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.46□□□□□ -1.54
BRF1Q92994 BBIP1P1-201ENST00000602999 279 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 AC007621.1-201ENST00000604544 437 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.46□□□□□ -1.54
BRF1Q92994 AC023813.4-201ENST00000607580 580 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 AC009233.1-201ENST00000616477 371 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 AC005086.4-201ENST00000623065 213 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 AC093648.1-201ENST00000623546 606 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 AC010149.2-201ENST00000637608 315 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.46□□□□□ -1.54
BRF1Q92994 AC083843.2-201ENST00000568248 6253 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
BRF1Q92994 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
BRF1Q92994 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
BRF1Q92994 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.46□□□□□ -1.54
BRF1Q92994 PCAT14-202ENST00000627127 3935 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
BRF1Q92994 SDAD1P1-202ENST00000524156 2051 ntBASIC5.46□□□□□ -1.54
BRF1Q92994 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.46□□□□□ -1.54
BRF1Q92994 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.46□□□□□ -1.54
BRF1Q92994 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
BRF1Q92994 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
BRF1Q92994 THUMPD3P1-201ENST00000506556 1480 ntBASIC5.45□□□□□ -1.54
BRF1Q92994 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.45□□□□□ -1.54
BRF1Q92994 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
BRF1Q92994 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
BRF1Q92994 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
BRF1Q92994 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms