Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 MTND3P13-201ENST00000574391 343 ntBASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 MIR3939-201ENST00000582614 106 ntBASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 VN1R83P-201ENST00000595685 445 ntBASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 AC124312.4-201ENST00000605533 310 ntBASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 AC069545.1-201ENST00000605671 358 ntBASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 SNORA51-201ENST00000606420 132 ntBASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 PART1_2.1-201ENST00000612397 250 ntBASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 AC073968.1-201ENST00000618594 637 ntBASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 AC073348.1-201ENST00000623002 331 ntBASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 OR1S1-201ENST00000624470 978 ntBASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 Z99496.1-201ENST00000469424 1477 ntBASIC3.16□□□□□ -1.9
TRUB1Q8WWH5 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
TRUB1Q8WWH5 MTND5P7-201ENST00000413558 1798 ntBASIC3.15□□□□□ -1.9
TRUB1Q8WWH5 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
TRUB1Q8WWH5 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.15□□□□□ -1.9
TRUB1Q8WWH5 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 SNORA31-201ENST00000362607 130 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 U3.6-201ENST00000363622 211 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 RNU6-335P-201ENST00000364563 113 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 ARF4P3-201ENST00000397387 509 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 AL024474.1-201ENST00000404655 591 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 RPL23AP47-201ENST00000408017 460 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 EI24P1-201ENST00000416584 867 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 Z75741.2-201ENST00000417272 1167 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 AC007435.1-201ENST00000421086 415 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 AC013410.2-201ENST00000422627 201 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 AC093151.1-201ENST00000427711 313 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 OR2AS1P-201ENST00000427827 319 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 AC008264.1-201ENST00000447612 367 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 PTGES3P5-201ENST00000455109 434 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 RPL7P19-201ENST00000469948 618 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 AC013828.1-201ENST00000481845 158 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 MTCO1P30-201ENST00000515244 580 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 RN7SKP31-201ENST00000516354 278 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 RNU6-352P-201ENST00000516908 107 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 AC087808.1-201ENST00000520501 361 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 AC138915.2-201ENST00000569776 97 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 AC023575.1-201ENST00000580510 358 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 AL591034.3-201ENST00000605511 685 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 AC024933.1-201ENST00000608472 348 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 AC024257.5-201ENST00000612739 531 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 AC112200.1-201ENST00000625015 234 ntBASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRUB1Q8WWH5 AC032011.1-201ENST00000611703 1549 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AC016769.3-201ENST00000396562 315 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 RNU4-78P-201ENST00000410940 126 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 RN7SKP58-201ENST00000411010 305 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 RNA5SP344-201ENST00000411081 104 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AL161449.1-201ENST00000414531 1199 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AL356968.1-201ENST00000416622 474 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 RPL18P10-201ENST00000425606 538 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 EXOSC3P1-201ENST00000448649 500 ntBASIC3.14□□□□□ -1.91
TRUB1Q8WWH5 AC097262.1-201ENST00000452559 548 ntBASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 128.8 ms