Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 KCTD9P5-201ENST00000504141 1170 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AC107016.2-201ENST00000547968 190 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AC015712.3-201ENST00000559380 164 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AC078899.3-201ENST00000599065 212 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AL627309.6-201ENST00000606857 840 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 XIST_intron.1-201ENST00000619444 68 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AL353743.4-201ENST00000422653 1547 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 Y_RNA.122-201ENST00000363331 96 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 RNU6ATAC40P-201ENST00000408580 137 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AC006960.1-201ENST00000419980 153 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 GAPDHP27-201ENST00000447427 1020 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 NIPA2P5-201ENST00000452282 464 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 RPL21P104-201ENST00000464143 478 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AC023043.2-201ENST00000589678 1026 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 DNAJC19P3-201ENST00000594491 331 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AL359535.1-201ENST00000612100 1087 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AL355379.1-201ENST00000405542 640 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 SAR1AP4-201ENST00000429225 591 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 CACYBPP2-201ENST00000453625 678 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AC008280.2-201ENST00000455473 307 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 HAUS1P1-201ENST00000505275 832 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 SNX5P1-201ENST00000505757 1041 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AC090695.1-201ENST00000561269 1222 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 TAB3P1-202ENST00000452645 1634 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 RNA5SP383-201ENST00000362934 120 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 SNORA36C-201ENST00000384289 132 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AC245054.2-201ENST00000415639 319 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AL662791.1-201ENST00000441992 928 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 TMEM248P1-201ENST00000510579 951 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 CD69-203ENST00000536709 1020 ntTSL 2 BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 ELOCP29-201ENST00000588193 334 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 XIAPP3-201ENST00000312918 795 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AL139039.1-201ENST00000401900 692 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 RNU4-26P-201ENST00000410270 107 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 VDAC1P3-201ENST00000434069 851 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 HMGN1P5-201ENST00000448591 263 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 RPL29P29-201ENST00000448725 423 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 DNAJC19P1-201ENST00000455312 319 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AC016687.1-201ENST00000482574 353 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AC138761.3-201ENST00000579993 334 ntBASIC0.83□□□□□ -2.28
SYNE1Q8NF91 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC0.83□□□□□ -2.28
SYNE1Q8NF91 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 OR4G2P-202ENST00000641004 1759 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 Y_RNA.796-201ENST00000364268 102 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 Y_RNA.799-201ENST00000364992 102 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 Y_RNA.338-201ENST00000365320 114 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 RNU6-76P-201ENST00000384060 104 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 SNORA80E-201ENST00000384744 137 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 SKINT1L-201ENST00000401057 817 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 ARL5AP4-201ENST00000430731 512 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AP001086.1-201ENST00000494882 321 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 SEC11B-201ENST00000518383 499 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC098826.3-201ENST00000603823 466 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AL392112.1-201ENST00000605115 829 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AL356274.1-201ENST00000617064 410 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AC092326.2-201ENST00000624772 1561 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 MFF-206ENST00000392059 1710 ntTSL 5 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 RN7SL75P-201ENST00000461926 281 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC0.82□□□□□ -2.28
SYNE1Q8NF91 FABP5P12-201ENST00000515543 389 ntBASIC0.82□□□□□ -2.28
SYNE1Q8NF91 AL389895.1-201ENST00000554127 252 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms