Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 AC091515.1-201ENST00000548110 679 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 AC087897.1-201ENST00000550134 156 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.71□□□□□ -1.82
RTL3Q8N8U3 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.71□□□□□ -1.82
RTL3Q8N8U3 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.71□□□□□ -1.82
RTL3Q8N8U3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.71□□□□□ -1.82
RTL3Q8N8U3 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.71□□□□□ -1.82
RTL3Q8N8U3 AC006077.1-201ENST00000604746 343 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 AC008083.4-201ENST00000615076 444 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 AC040168.1-201ENST00000623594 991 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 AC034229.5-201ENST00000624258 185 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 AC012442.3-202ENST00000636742 206 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 OR6C71P-202ENST00000641886 1107 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
RTL3Q8N8U3 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RTL3Q8N8U3 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 CR381670.1-201ENST00000624291 1693 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
RTL3Q8N8U3 AC244517.1-201ENST00000606030 2086 ntBASIC3.71□□□□□ -1.82
RTL3Q8N8U3 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 GDI2P1-201ENST00000429312 1336 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 FAM35DP-201ENST00000323387 2712 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 RNU6-283P-201ENST00000364788 107 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 SYF2P2-201ENST00000417620 583 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AL031313.1-201ENST00000448435 256 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 COX6CP18-201ENST00000448769 222 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AL009048.1-201ENST00000450437 298 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 SNORD105B-201ENST00000458770 79 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 KLRA1P-201ENST00000503499 986 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 RNU6-276P-201ENST00000516114 96 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 SNORA19.3-201ENST00000516165 130 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 NDUFS5P6-201ENST00000529136 295 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AC099489.2-201ENST00000574976 260 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AC020914.6-201ENST00000594327 272 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AL160237.3-201ENST00000604114 1013 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 Z82195.1-201ENST00000604558 398 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AC124312.4-201ENST00000605533 310 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AC069209.1-201ENST00000619282 651 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AC018755.4-201ENST00000619715 454 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AC104985.3-201ENST00000623479 597 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AC244205.2-202ENST00000635781 342 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 Z99496.1-201ENST00000469424 1477 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AC007823.1-201ENST00000569932 1566 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AC007256.1-201ENST00000392253 2765 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 CEP170P1-201ENST00000502249 4587 ntBASIC3.7□□□□□ -1.82
RTL3Q8N8U3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.7□□□□□ -1.82
RTL3Q8N8U3 AC007656.2-201ENST00000624902 4547 ntBASIC3.69□□□□□ -1.82
RTL3Q8N8U3 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 RNA5SP42-201ENST00000364278 115 ntBASIC3.69□□□□□ -1.82
RTL3Q8N8U3 AL359837.1-201ENST00000381357 287 ntBASIC3.69□□□□□ -1.82
RTL3Q8N8U3 RPS7P9-201ENST00000414704 586 ntBASIC3.69□□□□□ -1.82
RTL3Q8N8U3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 AC006989.1-201ENST00000427212 131 ntBASIC3.69□□□□□ -1.82
RTL3Q8N8U3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 PTGES3P1-201ENST00000439531 483 ntBASIC3.69□□□□□ -1.82
RTL3Q8N8U3 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.69□□□□□ -1.82
RTL3Q8N8U3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 AP001189.2-201ENST00000527320 189 ntBASIC3.69□□□□□ -1.82
RTL3Q8N8U3 OR4P1P-201ENST00000530808 1136 ntBASIC3.69□□□□□ -1.82
RTL3Q8N8U3 AC090502.2-201ENST00000549267 280 ntBASIC3.69□□□□□ -1.82
RTL3Q8N8U3 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.69□□□□□ -1.82
RTL3Q8N8U3 AL445435.1-201ENST00000604232 665 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms