Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 CYCSP45-201ENST00000402289 315 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AL590704.1-201ENST00000402856 794 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AL031577.2-201ENST00000404133 280 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AC073264.1-201ENST00000411508 416 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AL133384.1-201ENST00000412744 351 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 JKAMPP1-201ENST00000413804 919 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 snoU13.7-201ENST00000459220 104 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 RPL7P1-201ENST00000468161 747 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 RPL7P9-201ENST00000468715 747 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 RPL23AP2-201ENST00000471227 466 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AC005726.1-201ENST00000494679 427 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AC082651.2-201ENST00000496833 166 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AC104685.1-201ENST00000502445 371 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 SNX5P1-201ENST00000505757 1041 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AC093281.2-201ENST00000510153 597 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 MTCYBP37-201ENST00000510642 1133 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 MTCO3P28-201ENST00000513351 515 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 MIR3915-201ENST00000578518 97 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AC112230.1-201ENST00000604342 547 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AL022161.1-201ENST00000604390 213 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AC008083.4-201ENST00000615076 444 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AF246928.1-201ENST00000623768 87 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AC092184.1-201ENST00000625042 715 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 ERCC6-202ENST00000374127 1782 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 ANKRD20A17P-201ENST00000511745 1330 ntBASIC4.39□□□□□ -1.71
VPS52Q8N1B4 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.39□□□□□ -1.71
VPS52Q8N1B4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS52Q8N1B4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
VPS52Q8N1B4 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS52Q8N1B4 SNORA71.3-201ENST00000362582 128 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 RNA5SP44-201ENST00000410446 133 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 USP9YP33-201ENST00000412220 421 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 SEPT2P1-201ENST00000419651 180 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS52Q8N1B4 OR5BE1P-201ENST00000425977 939 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 AC096632.1-201ENST00000427395 310 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 VN1R108P-201ENST00000431580 830 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 USP9YP35-201ENST00000435696 412 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 RPL23AP16-201ENST00000441715 421 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 RPS4XP4-201ENST00000443195 763 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS52Q8N1B4 AL133547.1-201ENST00000448546 220 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 AL500522.2-201ENST00000448562 343 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 RPL31P3-201ENST00000458430 332 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 RPS4XP15-201ENST00000489210 795 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 HMGB1P21-201ENST00000502313 581 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS52Q8N1B4 MTATP6P22-201ENST00000507369 598 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.38□□□□□ -1.71
VPS52Q8N1B4 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS52Q8N1B4 AC110792.2-201ENST00000510278 224 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS52Q8N1B4 FTH1P9-201ENST00000513251 355 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 AC006499.2-201ENST00000513470 337 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS52Q8N1B4 DEFB131D-201ENST00000526803 184 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.38□□□□□ -1.71
VPS52Q8N1B4 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 AC007954.1-201ENST00000554198 494 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS52Q8N1B4 NBR2-204ENST00000587322 63 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.38□□□□□ -1.71
VPS52Q8N1B4 AC024560.3-201ENST00000608482 349 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.38□□□□□ -1.71
VPS52Q8N1B4 AL031667.3-201ENST00000620124 655 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 AC018816.2-201ENST00000621460 353 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 AL354798.1-201ENST00000622505 329 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.38□□□□□ -1.71
VPS52Q8N1B4 PCMTD1P7-201ENST00000634506 357 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 OR5BE1P-202ENST00000641168 1176 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS52Q8N1B4 OR5BR1P-201ENST00000524992 1330 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 ELL2P3-201ENST00000457883 1602 ntBASIC4.38□□□□□ -1.71
VPS52Q8N1B4 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
VPS52Q8N1B4 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VPS52Q8N1B4 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
VPS52Q8N1B4 AL079343.1-201ENST00000572358 1771 ntBASIC4.37□□□□□ -1.71
VPS52Q8N1B4 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 151.3 ms